From: Discovering genes associated with dormancy in the monogonont rotifer Brachionus plicatilis
 | sbs01 | sbs02 | sbs03 | sbs04 |
---|---|---|---|---|
# Reads* | 1021 | 1189 | 1117 | 1203 |
# average read length (bp) | 453 | 485 | 493 | 482 |
# singletons | 421 | 541 | 429 | 198 |
# clusters | 155 | 264 | 194 | 157 |
# putative transcripts | 576 | 805 | 623 | 355 |
Avg cluster size | 3.87 | 2.46 | 3.55 | 6.4 |
Largest cluster | 81 | 15 | 59 | 63 |
# clusters with 2 ESTs | 113 | 210 | 146 | 62 |
# clusters with 3 ESTs | 19 | 29 | 17 | 25 |
# clusters with 4–5 ESTs | 10 | 20 | 16 | 22 |
# clusters with 6–10 ESTs | 6 | 2 | 7 | 22 |
# clusters with > 10 ESTs | 7 | 3 | 8 | 26 |
Gene discovery | 0.56 | 0.68 | 0.56 | 0.30 |
Gene diversity | 0.41 | 0.46 | 0.38 | 0.16 |
# (%) with significant* SwissProt hits** | 308 (53%) | 415 (52%) | 296 (48%) | 100 (28%) |
# (%) with significant* trembl hits** | 328 (57%) | 439 (55%) | 309 (50%) | 110 (31%) |
# (%) with no hits | 242 (42%) | 363 (45%) | 309 (50%) | 243 (68%) |