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Table 3 List and description of genes transcripts strongly up-regulated by Fe deficiencya

From: Early iron-deficiency-induced transcriptional changes in Arabidopsis roots as revealed by microarray analyses

Probe ID

ATG

Description

p-value

251620_at

At3g58060

Cation efflux family protein (MTPc3)

0.001

245296_at

At4g16370

Oligopeptide transporter (OPT3)

0.000

251677_at

At3g56980

Basic helix-loop-helix transcription factor (BHLH039)

0.006

246998_at

At5g67370

Expressed protein with unknown function

0.005

262091_at

At1g56160

R2R3 transcription factor (MYB72)

0.001

254534_at

At4g19680

Fe2+ transport protein (IRT2)

0.008

249535_at

At5g38820

Amino acid transporter family protein

0.026

257689_at

At3g12820

Myb family transcription factor (MYB10)

0.002

245692_at

At5g04150

Basic helix-loop-helix transcription factor (BHLH101)

0.000

261684_at

At1g47400

Expressed protein with unknown function

0.020

248028_at

At5g55620

Expressed protein with unknown function

0.000

251987_at

At3g53280

Cytochrome P450 monooxygenase (CYP71B5)

0.022

264751_at

At1g23020

Fe3+-chelate reductase (ATFRO3)

0.008

262218_at

At1g74770

Zinc finger (C3HC4-type RING finger) family protein

0.016

251545_at

At3g58810

Member of the zinc transporter (ZAT) family (ATMTPa2)

0.048

248270_at

At5g53450

ORG1 (OBP3-RESPONSIVE GENE 1), serine/threonine protein kinases

0.000

250828_at

At5g05250

Expressed protein with unknown function

0.000

262412_at

At1g34760

14-3-3 protein GF14 omicron

0.005

259228_at

At3g07720

Expressed protein with unknown function and containing a kelch repeat

0.044

262217_at

At1g74770

Expressed protein with unknown function and containing a Zn binding domain

0.005

251293_at

At3g61930

Expressed protein with unknown function

0.044

257135_at

At3g12900

2-OG-Fe2+ oxygenase family protein

0.039

252502_at

At3g46900

Copper transport (COPT2)

0.012

254550_at

At4g19690

Fe2+ transport protein (IRT1)

0.039

  1. a Listed are the genes that showed a significantly (p < 0.05) increased in transcript abundance in response to Fe deficiency and whose intensity was shown in Figure 3 (Cluster 6, upper part). The list was sorted (top to bottom) to corresponds to the order shown in Figure 3. Gene annotation is based on the TAIR 8.0 release of the Arabidopsis genome.