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Table 4 Number of shared spliced-out domains

From: Comparative analysis indicates that alternative splicing in plants has a limited role in functional expansion of the proteome

Pfam Id

Domain name

A. thaliana

rice

maize

PF00400

WD40

15

10

7

PF00023

Ank

9

5

-

PF00076

RRM_1

10

11

4

PF02798

GST_N

3

3

3

PF00153

Mito_carr

3

6

3

PF01357

Pollen_allerg_1

-

3

3

PF03765

CRAL_TRIO_N

2

3

2

PF00270

DEAD

2

3

-

PF00226

DnaJ

3

-

2

PF00043

GST_C

3

2

3

PF07646

Kelch_2

2

-

3

PF00560

LRR_1

6

9

2

PF00072

Response_reg

2

2

-

PF00627

UBA

-

2

2

PF08240

ADH_N

1

3

4

PF00892

DUF6

6

1

3

PF08263

LRRNT_2

3

7

1

PF00249

Myb_DNA-binding

10

1

5

PF00614

PLDc

2

1

2

PF01535

PPR

7

3

1

PF00085

Thioredoxin

1

2

2

PF00035

Dsrm

2

1

2

PF00036

Efhand

11

10

1

PF00643

zf-B_box

2

2

1

PF00096

zf-C2H2

1

2

4

PF00642

zf-CCCH

1

6

4

PF00098

zf-CCHC

6

1

6

PF00641

zf-RanBP

2

1

2

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BMC Genomics

ISSN: 1471-2164

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