Table 3 Taxa within the Proteobacteria, which attracted at least 1% of the sequences within at least one of the four datasets.
Taxon level | Taxon | D. pulex | D. pulicaria | D. magna GS 20 | D. magna GS FLX | Average |
|---|---|---|---|---|---|---|
Class | Alphaproteobacteria | 3.9 | 8.0 | 4.5 | 6.6 | 5.7 |
Genus | Rhodobacter | 0.4 | 1.4 | 2.0 | 2.8 | 1.6 |
Class | Betaproteobacteria | 41.9 | 72.7 | 63.0 | 63.5 | 60.3 |
Family | Neisseriaceae | 0.1 | 1.2 | 0.0 | 0.3 | 0.4 |
Genus | Chromobacterium | 0.1 | 1.2 | 0.0 | 0.2 | 0.4 |
Order | Burkholderiales | 41.0 | 69.5 | 61.8 | 61.8 | 58.5 |
Genus | Methylibium | 2.8 | 3.9 | 1.0 | 1.2 | 2.2 |
Family | Alcaligenaceae | 0.3 | 0.6 | 1.2 | 1.1 | 0.8 |
Genus | Bordetella | 0.3 | 0.4 | 1.2 | 1.1 | 0.7 |
Family | Burkholderiaceae | 1.3 | 3.0 | 2.2 | 1.9 | 2.1 |
Genus | Burkholderia | 0.3 | 1.1 | 0.3 | 0.3 | 0.5 |
Genus | Cupriavidus | 0.5 | 1.0 | 1.4 | 1.1 | 1.0 |
Family | Comamonadaceae | 32.0 | 56.5 | 53.0 | 53.1 | 48.7 |
Genus | Acidovorax | 9.9 | 10.5 | 16.0 | 16.3 | 13.2 |
Genus | Rhodoverax | 0.9 | 4.1 | 3.2 | 2.8 | 2.8 |
Genus | Polaromonas | 3.9 | 12.8 | 14.6 | 14.7 | 11.5 |
Genus | Delftia | 2.5 | 5.5 | 0.2 | 0.2 | 2.1 |
Genus | Verminephrobacter | 6.8 | 4.8 | 4.4 | 4.6 | 5.2 |
Class | Gammaproteobacteria | 53.0 | 16.8 | 29.6 | 27.2 | 31.6 |
Genus | Pseudomonas | 43.3 | 11.5 | 0.8 | 1.5 | 14.3 |
Genus | Serratia | 8.6 | 0.0 | 0.0 | 0.0 | 2.2 |
Genus | Aeromonas | 0.1 | 3.8 | 0.0 | 0.0 | 1.0 |
Genus | Escherichia | 0.1 | 0.0 | 4.6 | 4.4 | 2.3 |