Table 5 Bioinformatics on the four highly informative SNPs.
| Â | SNP markers | |||
|---|---|---|---|---|
| Â | rs29016875 | rs29015574 | rs29024867 | rs41257187 |
Chromosome | 10 | 9 | 4 | 1 |
Gene candidates (NCBI-BLASTN) | ||||
Name: | Cytoplasmic dynein light chain (NW 001492841) | Rab3A-interacting molecule (NW_001495537) | Collagen I, alpha2 (NW 001494859) | Integrin β5 (NW001493888) |
Length: | 442/501 | 474/501 | 500/501 | 76/78 |
Identity: | 96% | 99% | 99% | 98% |
E-Value: | 9 × 10-122 | 0.00 | 0.00 | 4 × 10-32 |
Transcription factors (TRANSFAC-BLASTX) | ||||
| Â | No hits found | MEF-2D (Xl; T-01771) | Ceh-24 (S.Cb; T-03376) | No hits found |
|  |  | Irx-3 (Mm; T-02439) | RAR-β3 (Mm; T-01339) |  |