Genome wide signatures of positive selection: The comparison of independent samples and the identification of regions associated to traits

Table 4 Significant associations to traits across 10 Mb of BTA2

Locus	BTA2 position	P_ave	F_ST	RFI	Type_RFI	IMF	Type_IMF
rs29021692	60071311	0.625	0.098			2.782	TRO, TTL
rs29020674	60485596	0.097	0.253			2.513	TRO^α
rs29017559	62324132	0.155	0.068			1.985	TTL
rs29019351	64740286	0.866	0.313	3.057	TEM	2.483	TEM
rs29019352	64740428	0.115	0.314	3.130	TEM	2.490	TEM
rs29020718	64778749	0.096	0.204	2.203	TEM
rs29020715	64778938	0.904	0.204	2.111	TEM
rs29021800	64792978	0.134	0.312	3.122	TEM	2.403	TEM
rs29021802	64797701	0.043	0.179	1.986	TTL
rs29015936	65535887	0.853	0.034			2.229	TTL
rs29015937	65535915	0.464	0.100	1.986	TRO
rs29024553	68241372	0.278	0.070			2.034	TTL
rs29010833	69818303	0.680	0.041			2.267	TTL

P_ave is the average allele frequency of p₀ across the breeds, RFI is the ratio between the additive effect and its standard error, Type_RFI is the type of cattle in which the effect was estimated, IMF is the ratio between the additive effect and its standard error, Type_IMF is the type of cattle in which the effect was estimated. TEM temperate, TRO tropical, TTL total. TRO^α means the effect is the allele substitution effect.

ISSN: 1471-2164