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Table 1 Pairwise alignment results comparing both the NCBI bovine SMARCAL1 protein and the official gene model for SMARCAL1 (GLEAN_20241) to the human SMARCAL1 protein.

From: Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis

 

Bovine NCBI SMARCAL1 vs. Human SMARCAL1

GLEAN_20241 vs. Human SMARCAL1

Similarity Score

3483

3799

Match

74%

79%

Number of Matches

718

764

Number of Mismatches

208

165

Total Length of Gaps

43

33

  1. The official gene model shows a higher sequence homology to the human protein with more matches, shorter gaps, and fewer mismatches.