Table 4 Top 30 genes upregulated in CT blastocysts and donor cells compared to IVF blastocysts, sorted by P-value
From: Transcriptional reprogramming of gene expression in bovine somatic cell chromatin transfer embryos
Probe set ID | Gene Title | Gene ID | P value | Fold change CT1/IVF | Fold change CT4/IVF |
|---|---|---|---|---|---|
Bt.8933.1.S1_at | Adaptor-related protein complex 3, sigma 2 | AP3S2 | 0.0001 | 1.61 | 2.21 |
Bt.27382.1.A1_s_at | X-ray repair complementing defective repair in Chinese hamster cells 1 | XRCC1 | 0.0001 | 2.60 | 2.54 |
Bt.22224.1.S1_at | insulin receptor substrate 4 | IRS4 | 0.0002 | 2.31 | 2.10 |
Bt.3220.1.S1_at | Crystallin, lambda 1 | CRYL1 | 0.0003 | 1.94 | 1.82 |
Bt.7805.2.S1_a_at | Nuclear casein kinase and cyclin-dependent kinase substrate 1 | NUCKS1 | 0.0003 | 3.14 | 3.47 |
Bt.29540.1.S1_at | Arginine/serine-rich coiled-coil 1 | RSRC1 | 0.0004 | 1.57 | 3.09 |
Bt.19690.1.A1_at | Paraoxonase 1 | PON1 | 0.0005 | 1.53 | 3.74 |
Bt.20444.1.S1_at | thyroid hormone receptor associated protein 5 | THRAP | 0.0006 | 1.60 | 1.20 |
Bt.16122.1.S1_at | Sorbitol dehydrogenase | SORD | 0.0008 | 2.59 | 3.40 |
Bt.5737.1.S1_at | vacuolar protein sorting 26 homolog A | VPS26 | 0.0008 | 2.33 | 3.38 |
Bt.4292.1.S1_at | ARP3 actin-related protein 3 homolog (yeast) | ACTR3 | 0.0008 | 1.69 | 1.69 |
Bt.18230.1.S1_a_at | Nuclear autoantigenic sperm protein | NASP | 0.0011 | 1.95 | 2.75 |
Bt.9107.1.S1_a_at | phosphatidylinositol binding clathrin assembly protein | PIBCAP | 0.0014 | 1.83 | 2.93 |
Bt.663.1.S1_at | Palladin, cytoskeletal associated protein | PALLD | 0.0019 | 2.88 | 3.08 |
Bt.1743.2.S1_a_at | Phenylalanyl-tRNA synthetase 2, mitochondrial | FARS2 | 0.0021 | 1.64 | 2.98 |
Bt.13205.1.A1_at | Mitochondrial ribosomal protein S35 | MRPS35 | 0.0023 | 1.44 | 2.29 |
Bt.25100.1.A1_at | Cortactin | CTTN | 0.0026 | 1.26 | 1.58 |
Bt.783.1.S1_at | Aldehyde oxidase 1 | AOX1 | 0.0029 | 1.99 | 3.67 |
Bt.23608.1.S1_s_at | Keratin 8 | KRT8 | 0.0030 | 3.99 | 4.59 |
Bt.27284.1.S1_at | Eukaryotic translation initiation factor 4H isoform 2 | WBSCR1 | 0.0038 | 2.21 | 1.55 |
Bt.10898.1.S1_at | Tumor differentially expressed 2-like | TDE2L | 0.0041 | 1.98 | 5.08 |
Bt.28745.1.S1_at | Coagulation factor II receptor-like 1 | F2RL1 | 0.0045 | 2.25 | 1.85 |
Bt.5267.1.S1_at | Annexin A6 | ANXA6 | 0.0046 | 1.92 | 3.79 |
Bt.355.1.S1_at | Caldesmon 1 | CALD1 | 0.0047 | 1.71 | 1.79 |
Bt.20084.2.S1_at | Casein kinase 1, epsilon | CSNK1E | 0.0053 | 3.90 | 2.64 |
Bt.2823.3.S1_a_at | Chromosome 1 open reading frame 35 | C1orf35 | 0.0058 | 1.45 | 1.78 |
Bt.7671.1.S1_at | Interferon induced transmembrane protein 1 | IFITM1 | 0.0069 | 2.47 | 2.60 |
Bt.5319.1.S1_at | Anti-oxidant protein 2 (independent phospholipase A2) | AOP2 | 0.0071 | 2.03 | 3.70 |
Bt.23263.1.S1_s_at | Heat shock 90 kDa protein 1, beta | HSP90AB1 | 0.0072 | 1.30 | 1.90 |
Bt.19709.1.S1_at | LAG1 homolog, ceramide synthase 2 | LASS2 | 0.0072 | 1.25 | 1.69 |