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Table 1 List of genes belonging to some of the most significantly up-regulated Gene Ontology Categories

From: Activation of p53-regulated pro-apoptotic signaling pathways in PrP-mediated myopathy

Description

Gene Name

cell development

ARF6, KIF5C, PRM2, NEB, SOX9, NDN, RUNX1, FCER1G, ENAH, PRKDC, GADD45G, PURB, METRN, BIRC5, TRADD, LGALS1, EPHB1, TRIM35, GPX1, STMN3, E2F2, NEFL, DEDD, RHOA, JMY, MAL, DCX, CASP14, UNC5B, BNIP1, CD28, GDNF, ITGB1BP3, ALS2CR2, NFKB1, TIMP1, CARD10, SEMA6A, DAB1, CHRNA1, UCHL1, TNFRSF12A, HSPA1A, MYOG, AKT1S1, PIP5K1C, TRIAP1, PMAIP1, MT3, SOCS2, GADD45B, ABI2, TNNT2, GSK3B, SGPP1, RPS6KB1, HIPK2, IGFBP3, PERP, PPP1R13B, CDK5R1, HOOK1, EDA2R, CTF1, EHMT2, ITGA3, SOX10, HIPK3, E2F1, BCL2L13, PURA, YBX2, IBRDC2, APP, BOK, TNP1, FAF1, PHLDA1, CAMK1D, CSPG4, DOCK1, FARP2, DIABLO, GDF11, ZFP91, PEG3, PTPRC, BAK1, RHOT1, NRAS, CDKN1A, NAB2, DAP3

cell cycle

ANLN, CDC27, PRM2, TIMELESS, RB1, TACC3, SMARCB1, GADD45G, CDC14A, BIRC5, INCENP, CHES1, UHRF2, PDGFB, CGREF1, MIS12, E2F2, CDK6, PSMD2, JMY, CITED2, SUV39H2, PPP2R3A, CD28, ALS2CR2, PLK2, MERTK, CLASP1, CRKL, PRC1, TRIAP1, GADD45B, CPEB1, FOS, GSK3B, HIPK2, EHMT2, SPAG5, RANBP1, E2F8, E2F1, PLEKHO1, GAK, CCRK, PURA, HDAC5, RASSF4, APP, DHX16, E2F3, THPO, MKI67, BIN1, PTPRC, RGS2, ABL1, ANAPC1, NRAS, CDKN1A, JUNB, MDM2, ITGAE

programmed cell death

ARF6, SOX9, FCER1G, PRKDC, PURB, GADD45G, BIRC5, TRADD, TRIM35, GPX1, E2F2, NEFL, RHOA, DEDD, JMY, MAL, CASP14, GDNF, BNIP1, CD28, UNC5B, ALS2CR2, NFKB1, CARD10, SEMA6A, TNFRSF12A, HSPA1A, AKT1S1, PMAIP1, TRIAP1, GADD45B, SGPP1, GSK3B, IGFBP3, HIPK2, PERP, CDK5R1, PPP1R13B, EDA2R, HIPK3, E2F1, BCL2L13, PURA, IBRDC2, APP, BOK, FAF1, PHLDA1, CAMK1D, DOCK1, DIABLO, ZFP91, PEG3, PTPRC, BAK1, RHOT1, NRAS, CDKN1A, DAP3

cellular lipid metabolic process

ISYNA1, PRKAA1, LCAT, NEB, SULT2B1, PIP5K1C, B4GALNT1, VLDLR, FDPS, SERINC2, SGPP1, LDLR, ADIPOR2, RDH11, SYK, CDS2, SNCA, PRKAG2, MYO5A, ELOVL6, HEXB, CDS1, CD81, BMPR1B, ST6GALNAC6, SOAT1, FADS3, PIP5K1A, CHKB, PIGO, ELOVL3, UGCG, AYTL2, SLC37A4, AGPAT3, PBX1, AGPAT2, SYNJ1, INSIG1, PIGK, HMGCS2, PRKAB2, ACBD3, CYB5R3, PISD, SERINC1, MTMR7, HEXA

cellular ion homeostasis

CHRNA1, APP, ATOX1, CHRNG, APLP2, SV2A, CHRNB4, MT3, NDN, RYR3, PRND, ATP2A2, PTPRC, BAK1, SLC37A4, MT4, SYPL2, ANXA7, PRNP, SLC39A5, HEXB