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Table 2 List of genes belonging to some of the most significantly down-regulated Gene Ontology Categories

From: Activation of p53-regulated pro-apoptotic signaling pathways in PrP-mediated myopathy

Description

Gene Name

carboxylic acid metabolic process

NR3C1, TARSL2, AHCY, SHMT2, PTGES3, LYPLA1, IRG1, MCCC1, PRKAG1, MAT2B, CYP39A1, MCFD2, IDH2, GLUL, IARS, PYCR2, FBP2, PLP1, ABAT, ADIPOR1, LYPLA2, BCKDHA, CROT, GPD2, CAV1, MTHFD1, SH3GLB1, ACADSB

protein metabolic process

PPP3CB, BZW2, PPP2CB, AGA, CDC16, CHEK2, HERC2, UBE2B, PRMT7, NCKAP1, EIF4A2, CCT2, TLK2, KLK8, PDPK1, CSE1L, OMA1, UBQLN2, SLC30A9, PRKAR2A, HAT1, CAPZA2, CLK1, CPA3, LCK, CAMK2G, CAV1, MTM1, PSMB9, HUWE1, UBE2D1, PRKRIR, FKBP8, FKBP4, ARAF, RPS6KC1, PPP2R2A, VWF, CCT6A, GART, EPHA7, EIF3S6, WWP1, DVL1, IARS, ASPH, HTRA2, RNF6, RNF8, UBE2A, MCPT4, HS3ST5, CUL3, PCTK3, EEF2, UBE2G1, MMP13, UQCRC2, PRPF4B, AP3M1, BRCC3, SH3GLB1, RPL36, TARSL2, CDKL2, CAMK1, USP15, ULK2, BACE2, HECTD1, DNAJC12, ITGB4BP, CRY1, RAD21, FBXL5, DMD, MGRN1, RCHY1, IPO11, VBP1, USP1, VPS35, YME1L1, RPL22, COPB1, LGTN, GLMN, RSL1D1, RPL4, SUV420H2, ETF1, MAP2K5, USP38, EGLN1, TBCE, CUZD1, FURIN, PAIP1, CDC25B, EIF4G2, IFNAR1, TRIM23, CAV2, PSMD6, PIGY, LAP3

muscle development

CSRP3, DMD, MYL2, TSC1, MYH7, CAV2, MTM1, CAV1, ACTC1, DVL1, ACTG2, MYH6, CACNA1S, MEF2C