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Table 4 Distribution of 266 FISH-positioned contigs in 26 Hessian fly chromosomal segments (A-Z)

From: A BAC-based physical map of the Hessian fly genome anchored to polytene chromosomes

Chromosome segment

% Relative length

No. (%) of contigs

No. (%) of BAC clones

No. (%) of Qs

contig length (% of total)

A*

5.3

23 (8.6)

374 (8.2)

64 (7.3)

8,642 (8.8)

B

4.1

15 (5.6)

249 (5.5)

53 (6.0)

5,929 (6.0)

C

8.1

19 (7.1)

282 (6.2)

49 (5.6)

6,058 (6.2)

D

3.3

5 (1.9)

51 (1.2)

8 (0.9)

1,176 (1.2)

E

0.9

0

0

0

0

F*

5.3

23 (8.6)

460 (10.1)

118 (13.4)

9,145 (9.3)

G*

2.6

7 (2.6)

88 (1.9)

17 (1.9)

2,412 (2.5)

H

1.9

10 (3.8)

183 (4.0)

31 (3.5)

4,285 (4.4)

I

1.7

4 (1.5)

57 (1.2)

9 (1.0)

1,209 (1.2)

J*

2.9

6 (2.3)

185 (4.0)

45 (5.1)

3,059 (3.1)

K*

4.3

13 (4.9)

281 (6.2)

76 (8.6)

6,142 (6.3)

L*

5.3

13 (4.9)

196 (4.3)

41 (4.6)

4,871 (5.0)

M*

2.6

1 (0.4)

10 (0.2)

0

314 (0.3)

N*

6.7

9 (3.4)

148 (3.2)

32 (3.6)

3,386 (3.4)

O

4.3

9 (3.4)

192 (4.2)

58 (6.6)

4,142 (4.2)

P*

2.9

16 (6.0)

345 (7.6)

67 (7.6)

6,679 (6.8)

Q*

5.0

20 (7.5)

295 (6.5)

37 (4.2)

6,908 (7.0)

R

4.3

1 (0.4)

9 (0.2)

0

201 (0.2)

S

1.1

5 (1.9)

93 (2.0)

13 (1.5)

2,129 (2.2)

T*

3.1

12 (4.5)

188 (4.1)

33 (3.7)

3,795 (3.9)

U*

2.1

5 (1.9)

94 (2.1)

19 (2.2)

1,899 (1.9)

V

2.9

1 (0.4)

18 (0.4)

4 (0.5)

275 (0.3)

W

2.9

4 (1.5)

80 (1.8)

10 (1.1)

1,279 (1.3)

X*

5.7

11 (4.1)

169 (3.7)

24 (2.7)

3,304 (3.4)

Y

2.4

2 (0.8)

20 (0.4)

1 (0.1)

449 (0.4)

Z*

8.3

23 (8.6)

398 (8.7)

67 (7.6)

7,980 (8.1)

Centromeric*

 

9 (3.4)

98 (2.1)

6 (0.7)

2,563 (2.6)

Total

100.0

266 (100)

4,563 (100)

882 (100)

98,231 (100)

  1. *Chromosome segments known to contain at least one contig with a clone that hybridized to a different segment.