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Table 5 Representation of emblematic maize genes in the Palomero GS20–454 cDNA library.

From: Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing

    

Number of readsa

 

Gene Name

Length (nt)

Status

90%

93.3%

96.6%

100%

floricaula/leafy-like2

fl2

2921

partial CDS

1

---

---

---

barren stalk1

ba1

4570

complete CDS

31

15

3

---

rough sheath2

rs2

1420

complete CDS

7

6

2

1

alcohol dehydrogenase1

adh1

1389

partial CDS

59

59

56

34

alcohol dehydrogenase2

adh2-n

3535

complete CDS

55

48

46

28

knotted1-like homeodomain protein liguleless4b

lg4b

1123

partial CDS

6

4

4

3

knotted1-like homeodomain protein liguleless3

lg3

1537

complete CDS

---

---

---

---

indeterminate gametophyte1

Ig1

5431

complete CDS

31

13

9

5

ramosa2

ra2

6032

complete CDS

111

45

22

4

ramosa1

ra1

1519

complete CDS

---

---

---

---

teosinte glume architecture1

tga1

3219

complete CDS

13

9

---

---

P gene; transposon

 

7753

complete CDS

349

94

23

2

knotted-1

kn-1

1627

complete CDS

91

37

14

10

teosinte branched1

tb1

3188

partial CDS

---

---

---

---

indeterminate growth1

id1

1625

complete CDS

4

2

2

2

c1 locus myb homologue

c1

4059

complete CDS

85

41

5

---

Bronze2

bz2

2948

complete CDS

19

15

7

---

fertilization independent endosperm2

fie2

1171

complete CDS

17

15

15

10

  1. aA criterion of 90 to 100% identity was used to consider a hit valid