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Table 1 Discrepancies between oligo-capped cDNAs and annotated gene models

From: Inconsistencies of genome annotations in apicomplexan parasites revealed by 5'-end-one-pass and full-length sequences of oligo-capped cDNAs

Species

Nucleotide level (%)

Exon level Discrepant No./Total No. (%)

Gene level Discrepant No./Total No. (%)

Pf

2.6%

175/2,075 (8%)

133/1,543 (9%)

Pv

3.9%

320/2,371 (13%)

258/1,457 (18%)

Py

7.5%

302/1,939 (16%)

233/1,340 (17%)

Pb

3.0%

94/377 (25%)

53/254 (21%)

Cp

1.1%

33/669 (5%)

32/658 (5%)

Tg

7.0%

245/1,556 (16%)

191/780 (24%)

Average

4.2%

14%

16%

  1. For further detailed information see the text.