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Table 3 Simulation study: mean counts based on 200 replicates.

From: Identification of genes associated with multiple cancers via integrative analysis

Scenario

# gene

coef.

Approach

Pos. 1

Pos. 2

TP 1

TP 2

Overlap

1

20

0.25

Mc.TGD

13

12

10

10

5

   

TGDR

15

16

10

10

5

2

20

0.35

Mc.TGD

12

12

10

10

5

   

TGDR

14

14

10

10

5

3

500

0.25

Mc.TGD

28

27

9

10

5

   

TGDR

35

35

10

9

4

4

500

0.35

Mc.TGD

24

25

10

9

5

   

TGDR

34

34

10

9

5

5

1000

0.25

Mc.TGD

31

31

9

9

5

   

TGDR

39

38

9

9

4

6

1000

0.35

Mc.TGD

30

30

10

9

5

   

TGDR

37

38

10

9

5

  1. Pos. 1 (2): number of genes identified to be associated with cancer 1 (2); TP 1 (2): number of true positives for cancer 1 (2); Overlap: number of genes identified to be associated with both cancers.
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BMC Genomics

ISSN: 1471-2164

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