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Table 3 Summary of features over identified collinearity discontinuities and all annotated B. rapa sequence

From: Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis

 

All sequence

Genic

Intergenic

All CDs

Inter-chromosomal CDs

Intra-chromosomal CDs

%GC content

35.4

40.9

30.1

34.0

35.2

33.3

SSR density/kb

0.22

0.17

0.27

0.24

0.28

0.21

Gene model density/kb

0.23

n/a

n/a

0.20

0.23

0.18

Models with EST support/kb

0.13

n/a

n/a

0.09

0.11

0.08

Mapped Solexa leaf read density/kb

40.8

64.6

12.6

13.7

15.6

12.5