Table 3 Differential expression of genes mapping to "regulation of transcription, DNA-dependent" (GO Biological Process) in response to UCB treatment in SH-SY5Y cells.
Probe_Id | Gene_Name | Gene_Symbol | FC | Location |
|---|---|---|---|---|
202672_s_at | activating transcription factor 3 | ATF3 | 4.9 | nucleus; nucleolus |
200779_at | activating transcription factor 4 (tax-responsive enhancer element B67) | ATF4 | 1.7 | nucleus; cytoplasm; plasma membrane |
204998_s_at | activating transcription factor 5 | ATF5 | 1.6 | nucleus; cytoplasm |
204999_s_at | activating transcription factor 5 | ATF5 | 1.5 | nucleus; cytoplasm |
212501_at | CCAAT/enhancer binding protein (C/EBP), beta | CEBPB | 4.9 | nucleus; cytoplasm |
204203_at | CCAAT/enhancer binding protein (C/EBP), gamma | CEBPG | 2.4 | Nucleus |
212345_s_at | cAMP responsive element binding protein 3-like 2 | CREB3L2 | 1.7 | ER; ER membrane; integral to membrane; nucleus |
207630_s_at | cAMP responsive element modulator | CREM | 3.1 | Golgi apparatus; cytoplasm; nucleus; transcription factor complex |
209967_s_at | cAMP responsive element modulator | CREM | 2.9 | Golgi apparatus; cytoplasm; nucleus; transcription factor complex |
214508_x_at | cAMP responsive element modulator | CREM | 2.7 | Golgi apparatus; cytoplasm; nucleus; transcription factor complex |
209674_at | cryptochrome 1 (photolyase-like) | CRY1 | 1.4 | Cytoplasm; mitochondrion; nucleus |
209383_at | DNA-damage-inducible transcript 3 | DDIT3 | 6.7 | Nucleus |
219551_at | ELL associated factor 2 | EAF2 | 1.4 | nucleus; nuclear speck |
208436_s_at | interferon regulatory factor 7 | IRF7 | 1.7 | Cytoplasm; nucleus |
201466_s_at | jun oncogene | JUN | 3.5 | cytosol; nuclear chromosome; nucleus; TF complex |
201464_x_at | jun oncogene | JUN | 2.8 | cytosol; nuclear chromosome; nucleus; TF complex |
203752_s_at | jun D proto-oncogene | JUND | 1.6 | Chromatin; nucleus |
208961_s_at | Kruppel-like factor 6 | KLF6 | 1.8 | cellular component; cytoplasm; intracellular; nucleus |
204970_s_at | v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian) | MAFG | 1.5 | Nucleus |
213696_s_at | mediator of RNA polymerase II transcription, subunit 8 homolog (S. cerevisiae) | MED8 | 1.6 | mediator complex; nucleus |
212803_at | NGFI-A binding protein 2 (EGR1 binding protein 2) | NAB2 | 1.5 | Nucleus |
203574_at | nuclear factor, interleukin 3 regulated | NFIL3 | 2.4 | Nucleus |
221803_s_at | nuclear receptor binding factor 2 | NRBF2 | 1.3 | Cytoplasm; nucleus |
202861_at | period homolog 1 (Drosophila) | PER1 | 1.7 | Cytoplasm; nucleus |
36829_at | period homolog 1 (Drosophila) | PER1 | 1.6 | Cytoplasm; nucleus |
217861_s_at | prolactin regulatory element binding | PREB | 1.9 | ER; membrane; nucleus |
202148_s_at | pyrroline-5-carboxylate reductase 1 | PYCR1 | 1.5 | mitochondrion |
215670_s_at | SCAN domain containing 2 | SCAND2 | 1.4 | Nucleus |
201471_s_at | sequestosome 1 | SQSTM1 | 2.4 | cytoplasm; cytosol; late endosome; nucleus |
208991_at | signal transducer and activator of transcription 3 (acute-phase response factor) | STAT3 | 1.4 | Cytoplasm; nucleus |
213024_at | TATA element modulatory factor 1 | TMF1 | 1.8 | Golgi apparatus |
218145_at | tribbles homolog 3 (Drosophila) | TRIB3 | 6.7 | Nucleus |
208763_s_at | TSC22 domain family, member 3 | TSC22D3 | 1.6 | Nucleus |
218012_at | TSPY-like 2 | TSPYL2 | 1.9 | Cytoplasm; nucleolus; nucleus |
200670_at | X-box binding protein 1 | XBP1 | 2.6 | Nucleus |
207219_at | zinc finger protein 643 | ZNF643 | 1.4 | intracellular; membrane; nucleus |