Table 4 Input DNA copy number and genotype call accuracy
From: High-throughput single nucleotide polymorphism genotyping using nanofluidic Dynamic Arrays
| Â | Â | Â | Copy number per chamber | ||||
|---|---|---|---|---|---|---|---|
| Â | Â | Â | 0.9 | 4.5 | 9 | 45 | 90 |
A1A1 | Genotype Count | No Call | 50 | 2 | Â | Â | Â |
| Â | Â | YY | 73 | 121 | 123 | 123 | 123 |
| Â | Call rate | Â | 59.3% | 98.4% | 100% | 100% | 100% |
| Â | % Error | Â | 0% | 0% | 0% | 0% | 0% |
A1A2 | Genotype Count | No Call | 72 | 4 | 7 | Â | Â |
| Â | Â | XX | 15 | 18 | 16 | Â | Â |
| Â | Â | XY | 8 | 80 | 89 | 123 | 123 |
| Â | Â | YY | 28 | 21 | 11 | Â | Â |
| Â | Call rate | Â | 41.5% | 96.7% | 94.3% | 100% | 100% |
| Â | % Error | Â | 35% | 32% | 22% | 0% | 0% |
A2A2 | Genotype Count | No Call | 39 | 4 | Â | Â | Â |
| Â | Â | XX | 84 | 119 | 123 | 123 | 123 |
| Â | Call rate | Â | 68.3% | 96.7% | 100% | 100% | 100% |
| Â | % Error | Â | 0% | 0% | 0% | 0% | 0% |
Grand No Call | Â | Â | 161 | 10 | 7 | 0 | 0 |
Grand Error | Â | Â | 43 | 39 | 27 | 0 | 0 |
Grand Call Rate | Â | Â | 56.4% | 97.3% | 98.1% | 100% | 100% |
Grand % Error | Â | Â | 11.7% | 10.6% | 7.3% | 0.0% | 0.0% |