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Table 4 DEFB copy numbers per diploid genome estimated by 454 ultra-deep sequencing (run 2: F5; run 3: F2, F4, F6, F8) in comparison to alternative methods.

From: Haplotyping and copy number estimation of the highly polymorphic human beta-defensin locus on 8p23 by 454 amplicon sequencing

 

454

Alternative methods

454-Altern.

Amplicon

F2

F5 f

F5 r

F4

F6

F8

Average

Average

 

NA12760

8

7

7

7

5

9

7

6

+1

NA18502

11

10

11

 

9

10

10

9

+1

NA18552

 

nd

nd

8

  

8

2

+6

NA18858

10

nd

nd

12

11

10

11

8

+3

  1. nd: no data; blank: non polymorphic.