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Table 6 Contigs and singletons which did not have hit in the ENSEMBL collection of mouse transcripts (ECMT)

From: Heart transcriptome of the bank vole (Myodes glareolus): towards understanding the evolutionary variation in metabolic rate

  

Without hits in ECMT

Hits in genome

Hits in AceView

   

only mouse

only rat

both

mouse

Contigs

N

36,298

4,247

2,810

14,065

5,948

 

%

100

11.7

7.7

38.7

16.4

Singletons

N

340,806

25,423

17,687

71,565

29,305

 

%

100

7.5

5.2

21.0

8.6

  1. Results of blast searches against mouse and rat genomes and the AceView collection of mouse transcribed sequences.