From: Comparing de novo assemblers for 454 transcriptome data
Assembly pair | Â | % EST clusters hit | % EST bases covered |
---|---|---|---|
CLC | MIRA | 65.4 | 65.1 |
MIRA | Newbler 2.5 | 65.4 | 65.3 |
MIRA | SeqMan | 64.9 | 64.6 |
CLC | Newbler 2.5 | 64.7 | 64.6 |
Newbler 2.5 | SeqMan | 63.2 | 62.9 |
CAP3 | Newbler 2.5 | 63.0 | 62.6 |
CAP3 | CLC | 62.9 | 62.4 |
CLC | SeqMan | 62.9 | 62.5 |
CLC | Newbler 2.3 | 62.4 | 62.5 |
CAP3 | MIRA | 62.2 | 61.9 |
CAP3 | SeqMan | 61.7 | 61.3 |
MIRA | Newbler 2.3 | 61.7 | 61.9 |
Newbler 2.3 | Newbler 2.5 | 61.4 | 61.5 |
Newbler 2.3 | SeqMan | 60.0 | 60.2 |
CAP3 | Newbler 2.3 | 59.7 | 59.6 |