Primer1 | Sequence | Strand2 | Notes3 |
---|---|---|---|
1R | CGAAGATAAGTAATTGGT | AS | ~300 bp 5'of each D1 gene |
2F | GTTCTGTTTTTAGTACCG | S | RC of 12R, located ~2.2 kb 3' of all D1 genes |
6F | TTGAGAGCTCGTCACGTG | S | ~900 bp 3' of the D1-b gene |
7F | TGCAATCATTTTACATATTACTGGTT | S | ~800 bp 3' of the A2 gene |
9F | GGGATTACATACCATACCGCA | S | ~1 kb 3' of the B8 gene |
11F | ATCCTTTGAAACAGCCCCTC | S | RC of 10R, located ~2.4 kb 3' of the D1-y gene |
13F | TGGGAAATACTGACTGCC | S | RC of 5R, located ~2.7 kb 3' of the E2 gene |
17F4 | TTTCCAATGTCCTTATTTACGACTTATA | S | qPCR primer with 18R1 |
21F | AATGTATTCGGCAGCGAGGT | S | ~1 kb 3' of the D1 genes |
5R | GGCAGTCAGTATTTCCCA | AS | RC of 13F, located ~1.1 kb 5' of the D1-b gene |
8R | AAGCCTGCTGCTCAATCATC | AS | ~1.2 kb 5' of the A2 gene |
10R | GAGGGGCTGTTTCAAAGGAT | AS | RC of 11F, located ~1.1 kb 5' of the B8 gene |
12R | CGGTACTAAAAACAGAAC | AS | RC of 2F, located ~1 kb 5' of all D1 genes |
14R | AAGTGGTGGTAGGCTCAGTAGTA | AS | ~700 bp 5' of the E2 gene |
18R4 | ATGATTCACAGGTTTGTTGCCTC | AS | qPCR primer with 17F1 |