Skip to main content

Table 4 Selected genes up-regulated in swarm center

From: Gene expression in Pseudomonas aeruginosa swarming motility

Gene number

Gene name

Product name

Swarm center vs. non-swarming fold change (log2)

Adaptation, Protection

 

PA01401

ahpF

alkyl hydroperoxide reductase subunit F

4.5

PA08481

 

probable alkyl hydroperoxide reductase

5.4

PA08491

trxB2

thioredoxin reductase 2

3.7

PA32871

 

conserved hypothetical protein

4.7

PA42361

katA

catalase

3.4

PA46131

katB

catalase

4.4

Energy metabolism

 

PA41332

 

cytochrome c oxidase subunit (cbb3-type)

1.6

Hypothetical, unclassified, unknown

 

PA32371

 

hypothetical protein

5.4

PA32871

 

hypothetical protein

4.7

PA35191

 

hypothetical protein

3.6

PA35203

 

hypothetical protein

1.8

Nucleotide biosynthesis and metabolism

 

PA55411

pyrQ

dihydroorotase

2.5

Transcriptional regulators

 

PA48781

 

probable transcriptional regulator

3.7

Transport of small molecules

 

PA2322

gntT

gluconate permease

2.0

PA31872

gltK

ATP-binding component of ABC transporter

2.6

PA31882

gltG

permease of ABC sugar transporter

3.1

PA3189

gltF

permease of ABC sugar transporter

2.5

PA35231

mexP

probable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor

4.2

PA39201

cueA

copper homeostasis P-type ATPase

2.6

PA5082

 

probable binding protein component of ABC transporter

1.5

  1. 1: Genes up-regulated in swarm center vs. NS and up-regulated in swarm center vs. tendril tip.
  2. 2: Genes up-regulated in swarm center vs. NS and up-regulated in tendril tip vs. NS (Table 1).
  3. 3: Gene up-regulated in swarm center vs. tendril tip only.