Skip to main content

Table 1 Viral sequences contained in the sweetpotato gene index

From: A sweetpotato gene index established by de novo assembly of pyrosequencing and Sanger sequences and mining for gene-based microsatellite markers

Contig/singleton ID length ID E-value Text annotation
03767 1851 Q59A02 0.0 Polyprotein (Fragment) n = 1 Tax = Sweet potato feathery mottle virus RepID = Q59A02_9POTV
10592 1329 Q6XKE6 6e-49 Reverse transcriptase n = 1 Tax = Petunia vein clearing virus isolate Hohn RepID = POLG_PVCV2
12069 526 O39734 3e-90 Polyprotein n = 1 Tax = Sweet potato feathery mottle virus RepID = O39734_9POTV
12293 504 UPI0000163D32 6e-67 P3 protein n = 1 Tax = Sweet potato feathery mottle virus RepID = UPI0000163D32
13375 686 O39734 2e-84 Polyprotein n = 1 Tax = Sweet potato feathery mottle virus RepID = O39734_9POTV
23606 528 Q9QS58 1e-101 Coat protein AV1 n = 1 Tax = Sweet potato leaf curl virus RepID = Q9QS58_9GEMI
27246 614 Q9QBT4 2e-67 Polyprotein n = 1 Tax = Potato virus A RepID = Q9QBT4_PVMA
27646 725 UPI0000156FE9 1e-140 NIb protein n = 1 Tax = Sweet potato feathery mottle virus RepID = UPI0000156FE9
29621 347 Q9QS57 2e-47 AC3 n = 1 Tax = Sweet potato leaf curl virus RepID = Q9QS57_9GEMI
131893_1741_0589-I 221 UPI0000163D38 9e-36 coat protein n = 1 Tax = Sweet potato feathery mottle virus RepID = UPI0000163D38
158451_1257_3402-I 250 B3Y549 4e-37 AV2 protein n = 1 Tax = Sweet potato leaf curl virus RepID = B3Y549_9GEMI
DC882409.1 418 Q80MW4 2e-28 Polyprotein (Fragment) n = 1 Tax = Sweet potato feathery mottle virus RepID = Q80MW4_9POTV
EE874850.1 669 Q8JJW9 1e-106 Polyprotein n = 1 Tax = Sweet potato chlorotic stunt virus RepID = Q8JJW9_9CLOS
FRFM4LP02P1T45-II 318 UPI0000163D31 5e-34 HC-Pro protein n = 1 Tax = Sweet potato feathery mottle virus RepID = UPI0000163D31
FRFM4LP02QRY4N-II 502 Q5GIU0 5e-45 Polyprotein (Fragment) n = 1 Tax = Sweet potato feathery mottle virus RepID = Q5GIU0_9POTV
FRFM4LP02R1W0W-II 382 UPI0000163D34 4e-64 CI protein n = 1 Tax = Sweet potato feathery mottle virus RepID = UPI0000163D34
FRFM4LP02RT0LA-II 328 C4N332 2e-36 Polyprotein n = 1 Tax = Sweet potato feathery mottle virus RepID = C4N332_9POTV
FRFM4LP02RUC7U-II 451 O39734 4e-73 Polyprotein n = 1 Tax = Sweet potato feathery mottle virus RepID = O39734_9POTV