From: Genome-wide BAC-end sequencing of Cucumis melo using two BAC libraries
Plant genomes | No. of masked BES with BLAST matches1 | No. of masked BES pairs withM BLAST matches2, 3 | On same chromosome, contig or scaffold3, 4 | Within 50 - 500 kb3, 4 | In the correct orientation3, 4 | %5 | Total %6 | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
Species | Pseudo_ molecules7 | Length (Mb)8 | No. of mapping Loci9 | No. of mapping loci | |||||||
A. thaliana | 5 | 135 | 2,958 (6.3%) | 135 (0.4%) | 86 (63.7%) | 111 (1.3) | 15 (17%) | 15 | 11 (73%) | 8 | 0.05 |
V. vinifera | 19 | 487 | 4,919 (10.4%) | 334 (1.5%) | 195 (58.4%) | 350 (1.8) | 86 (44%) | 91 | 56 (65%) | 17 | 0.26 |
G. max | 20 | 975 | 4,446 (9.4%) | 282 (1.3%) | 171 (60.6%) | 437 (2.6) | 73 (43%) | 120 | 57 (78%) | 20 | 0.26 |
M. truncatula | 8 | 241 | 3,214 (6.8%) | 155 (0.7%) | 102 (65.8) | 210 (2.0) | 30 (29%) | 36 | 24 (80%) | 15 | 0.11 |
P. trichocarpa | 19 | 370 | 4,676 (9.9%) | 315 (1.4%) | 171 (54.3%) | 276 (1.6) | 95 (55%) | 123 | 76 (80%) | 24 | 0.35 |
C. sativus 10 | 117 | 149 | 30,818 (65.4%) | 10,296 (47.6%) | 6,475 (62.9%) | 31,385 (4.8) | 4,945 (76%) | 17,456 | 4,138 (84%) | 40 | 19.14 |