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Table 2 Number of differentially expressed genes between the fifteen genotypes at time point "3d of germination" in pair-wise comparisons.

From: Transcriptome analysis of a barley breeding program examines gene expression diversity and reveals target genes for malting quality improvement

 

Bonanza

Cree

Dickson

Excel

Lacey

M1

M44

M46

M55

M66

M78

Manker

Morex

Robust

Stander

Bonanza

0

              

Cree

431

0

             

Dickson

558

288

0

            

Excel

208

368

463

0

           

Lacey

216

382

470

80

0

          

M1

388

96

346

339

350

0

         

M44

210

289

382

72

60

272

0

        

M46

218

276

362

88

89

268

3

0

       

M55

256

387

475

68

81

352

65

81

0

      

M66

259

426

537

238

261

413

238

259

277

0

     

M78

204

337

450

58

52

304

47

66

75

255

0

    

Manker

337

372

450

177

191

347

142

171

158

310

181

0

   

Morex

226

269

413

235

229

266

178

183

261

290

166

371

0

  

Robust

245

330

439

87

119

302

79

92

101

290

46

193

194

0

 

Stander

249

358

440

69

136

335

85

97

103

263

99

180

221

121

0

  1. These numbers were determined based on ANOVA (FDR ≤ 0.01) followed by a two-fold filtering and a SNK post-hoc test.