Table 5 Candidate genes for the improvement of malting quality.
Probe Set Name | E value | Putative function | ME | GP | S/T | DP | AA | BG | Map loc. |
|---|---|---|---|---|---|---|---|---|---|
"Out of steep" | |||||||||
Contig10584_at | _ | No hit | **(+) | ||||||
Contig12460_at | 7.00E-22 | Hypothetical protein P0657H12.23 (Oryza sativa) | **(-) | *(+) | |||||
Contig13150_at | _ | No hit | *(+) | ||||||
Contig14046_at | 1.00E-21 | Hypothetical protein OJ1756_H07 (Oryza sativa) | *(-) | *(-) | |||||
Contig17218_at | _ | No hit | **(+) | *(+) | |||||
Contig17647_at | 2.00E-29 | Os08g0100400 protein | *(-) | *(-) | |||||
Contig21675_at | _ | No hit | ***(+) | **(+) | *(-) | ||||
Contig22323_at | 6.00E-38 | 26S protease regulatory subunit 6B | **(+) | *(+) | |||||
Contig23156_at | _ | No hit | *(-) | *(-) | **(+) | ||||
Contig25703_at | 2.00E-32 | F-box domain containing protein | **(+) | *(-) | |||||
Contig2885_at | 4.00E-60 | Eukaryotic translation initiation factor 5 (Zea mays) | *(+) | **(-) | |||||
Contig3129_at | 1.00E-124 | Mitochondrial prohibitin complex protein 2 (Oryza sativa) | *(-) | **(-) | *(-) | ||||
Contig3173_at | 2.00E-23 | Low temperature and salt responsive protein (Pennisetum americanum) | *(+) | 2H (51.75) | |||||
Contig3191_at | 1.00E-121 | Mitochondrial ATP synthase (Triticum aestivum) | *(+) | ||||||
Contig3339_at | 1.00E-115 | Protein CP5 | *(+) | *(-) | |||||
Contig3668_at | 1.00E-115 | Ice recrystallization inhibition protein 1 precursor (Triticum aestivum) | *(-) | ||||||
Contig3861_at | _ | No hit | *(-) | *(-) | *(-) | ***(-) | |||
Contig3863_s_at | _ | No hit | *(-) | *(-) | **(-) | ||||
Contig398_s_at | 6.00E-91 | 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor | *(-) | ||||||
Contig4837_at | 1.00E-52 | Small nuclear ribonucleoprotein Sm D2 | *(+) | **(+) | |||||
Contig4839_at | 5.00E-52 | Small nuclear ribonucleoprotein Sm D2 | *(-) | ||||||
Contig6845_at | _ | No hit | *(-) | *(-) | |||||
Contig9672_at | 7.00E-52 | Unknown | *(+) | *(+) | **(+) | 3H (162.15) | |||
Contig9733_at | 9.00E-98 | RING-H2 finger protein | *(-) | ||||||
EBem10_SQ004_D16_at | _ | No hit | *(+) | *(-) | |||||
EBpi01_SQ001_C06_at | _ | No hit | ***(-) | *(-) | |||||
HB20B24r_s_at | 2.00E-85 | Hordoindoline b (Hordeum vulgare) | *(+) | ||||||
HS04A09u_s_at | _ | No hit | ***(+) | *(+) | 7H (140.21) | ||||
HT12D12u_s_at | 5.00E-48 | Glutaredoxin (Triticum aestivum) | *(-) | ||||||
HV_CEa0001D21r2_at | _ | No hit | **(+) | *(-) | 2HS | ||||
HV_CEa0011J09r2_at | 2.00E-18 | Putative B12D protein (Oryza sativa) | **(-) | **(+) | 1H (128.14) | ||||
HVSMEa0001B10r2_x_at | _ | No hit | *(-) | ||||||
HVSMEl0003B06r2_at | _ | No hit | **(+) | *(+) | |||||
HVSMEl0007F21r2_s_at | _ | No hit | **(+) | ||||||
HVSMEl0023H09r2_at | _ | No hit | *(-) | ||||||
rbags14a14_at | 2.00E-36 | Putative prolyl endopeptidase (Oryza sativa) | *(-) | ||||||
rbags14a14_s_at | 2.00E-36 | Putative prolyl endopeptidase (Oryza sativa) | **(-) | 6H (45.44)\ | |||||
"3d of germination" | |||||||||
Contig12150_at | _ | No hit | *(-) | *(-) | 7H (140.21) | ||||
Contig12460_at | 7.00E-22 | Hypothetical protein P0657H12.23 (Oryza sativa) | **(-) | *(-) | *(+) | ||||
Contig13847_s_at | 3.00E-85 | Putative subtilisin-like serine protease (Oryza sativa) | **(+) | *(-) | |||||
Contig14046_at | 1.00E-21 | Hypothetical protein OJ1756_H07 (Oryza sativa) | **(-) | *(-) | |||||
Contig14709_at | 3.00E-37 | Os01g0579800 protein | **(-) | *(-) | *(-) | 1H (138.31) | |||
Contig159_at | 3.00E-53 | Histone H4 | *(+) | *(+) | *(+) | ***(+) | |||
Contig16647_at | 6.00E-42 | Os12g0566100 protein | **(-) | *(-) | |||||
Contig17218_at | _ | No hit | **(+) | *(+) | |||||
Contig173_at | 6.00E-54 | Histone H4 | *(-) | ||||||
Contig17647_at | 2.00E-29 | Os08g0100400 protein | **(-) | *(-) | |||||
Contig22323_at | 6.00E-38 | 26S protease regulatory subunit 6B | **(+) | *(+) | |||||
Contig2885_at | 4.00E-60 | Eukaryotic translation initiation factor 5 (Zea mays) | *(+) | *(+) | **(-) | ||||
Contig3129_at | 1.00E-124 | Mitochondrial prohibitin complex protein 2 (Oryza sativa) | **(-) | *(-) | |||||
Contig3668_at | 1.00E-115 | Ice recrystallization inhibition protein 1 precursor (Triticum aestivum) | *(-) | ||||||
Contig3863_s_at | _ | No hit | *(-) | *(-) | **(-) | ||||
Contig4384_at | 1.00E-92 | DAG protein, chloroplast precursor | *(-) | 5H (103.92) | |||||
Contig500_at | 2.00E-53 | Histone H4 | *(-) | *(-) | **(-) | ||||
Contig5185_at | 1.00E-145 | RNase S-like protein (Hordeum vulgare) | *(-) | 1H (135.56) | |||||
Contig6845_at | _ | No hit | **(-) | *(-) | |||||
Contig7285_at | 2.00E-96 | Hypothetical protein P0576F08.31(Oryza sativa) | *(+) | 6H (43.15) | |||||
Contig7399_s_at | 1.00E-115 | Ubiquitin carboxyl-terminal hydrolase isozyme L3 | **(+) | **(+) | *(-) | 6H (60.23) | |||
HB27E22r_at | _ | No hit | *(+) | ||||||
HS04A09u_s_at | _ | No hit | ***(+) | *(+) | 7H (140.21) | ||||
HVSMEl0003B06r2_at | _ | No hit | **(+) | *(+) | |||||
HVSMEl0007F21r2_s_at | _ | No hit | *(+) | ||||||