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Table 4 Chromosome coverage of substituted segments in the CSSLs.

From: Developing high throughput genotyped chromosome segment substitution lines based on population whole-genome re-sequencing in rice (Oryza sativa L.)

Chr

Length

Times

Coverage length

Coverage rate

 

MM-map

GR-map

MM-map

GR-map

MM-map

GR-map

MM-map

GR-map

1

104.16

157.27

2.39

3.49

42.39

41.23

97.2%

91.5%

2

99.90

166.78

2.78

4.53

32.78

35.24

91.3%

95.7%

3

83.20

114.56

2.29

3.07

32.93

35.30

90.5%

94.8%

4

66.00

108.95

1.87

3.04

35.20

35.86

100.0%

100.0%

5

72.61

122.71

2.44

4.08

29.90

29.86

100.0%

99.4%

6

108.25

106.60

3.47

3.32

30.00

29.56

95.8%

92.0%

7

55.35

59.31

1.86

1.95

27.00

28.92

90.9%

95.3%

8

56.60

125.19

2.00

4.39

24.76

27.62

87.5%

96.8%

9

65.46

73.09

2.84

3.07

21.23

22.98

92.3%

96.4%

10

47.07

65.41

2.06

2.76

15.27

14.05

66.7%

59.4%

11

82.33

104.22

2.89

3.38

28.50

29.42

100.0%

95.4%

12

41.25

66.40

1.50

2.39

21.39

26.36

77.8%

95.0%

Genome

882.18

1270.48

2.37

3.32

341.40

356.41

91.7%

93.3%