Table 7 Total nucleotide diversity, diversity in coding sequences, noncoding sequences (introns and UTRs), replacement and silent codon positions
From: Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes
Genome | Total diversity (× 10-3) | Coding (× 10-3) | Noncoding (× 10-3) | Replacement (× 10-3) | Silent (× 10-3) | Ratio replac./silent | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|  | θw | θπ | D | θw | θπ | θw | θπ | θw | θπ | θw | θπ | θw | θπ |
T.a. A | 0.59c | 0.57c | -0.09b | 0.54b | 0.55b | 0.76bc | 0.72bc | 0.30b | 0.30b | 1.38bc | 1.46a | 0.25a | 0.24a |
T.a. B | 0.56c | 0.57c | 0.00b | 0.55b | 0.59b | 0.89bc | 0.89b | 0.32b | 0.36b | 1.40bc | 1.44a | 0.22a | 0.22a |
T.a. D | 0.22d | 0.18e | -0.57c | 0.22c | 0.18c | 0.36d | 0.32d | 0.06c | 0.06c | 0.79d | 0.59b | 0.10b | 0.11b |
T.d. A | 0.68b | 0.70d | 0.09b | 0.58b | 0.60b | 0.91bc | 0.98b | 0.32b | 0.36b | 1.43bc | 1.47a | 0.23a | 0.26a |
T.d. B | 0.76b | 0.72cb | -0.12b | 0.56b | 0.55b | 1.21b | 1.17b | 0.31b | 0.30b | 1.47b | 1.46a | 0.29a | 0.29a |
Synth. D | 1.31a | 1.51a | 0.56a | 1.13a | 1.25a | 1.84a | 2.09a | 0.52a | 0.53a | 3.35a | 3.87d | 0.17ab | 0.16b |