Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)

Table 1 Wheat OPA evaluation

Genome	Total assayed	No. failed SNPs	No. good SNPs	No. polymorphic SNPs (%)	No. alleles detected	PIC
A	642	93	549	368 (67%)	1.67	0.165
B	675	109	566	374 (66%)	1.67	0.170
D	219	35	184	107 (58%)	1.60	0.120
Total	1536	237	1299	849 (65%)
Mean					1.66	0.160

ISSN: 1471-2164