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Table 5 RT-PCR validation.

From: Alternative splicing enriched cDNA libraries identify breast cancer-associated transcripts

Library Origin

Selected ASSETs

ASSET validation

Heteroduplex validation

Cross-validation

Lib_1

6

5

2

4

Lib_2

7

7

4

7

Lib_1 & Lib_2

5

5

0

-

  1. Library Origin: library where the ASSET was captured from; selected ASSETs: number of randomly selected ASSETs; ASSET validation: to confirm the presence of the ASSET in the same RNA used for library construction; heteroduplex validation: amplification of alternatively spliced transcripts that could have participated in the heteroduplex formation; and cross-validation: amplification of ASSETs specifically captured from one library using the cDNA template from the other library.