From: Systematic evaluation of genome-wide methylated DNA enrichment using a CpG island array
Enzymes | Recognition sequence | Percentage coverage of CGI locis | Percentage coverage of CpGs | ||
---|---|---|---|---|---|
 |  | Number | Percent | CGI Library | Whole genome * |
HpaII (BsiSI) | CCGG | 8,145 | 87.48% | 11.31% | 8.60% |
Hin6I (HinP1I) | GCGC | 7,877 | 84.60% | 11.85% | 6.40% |
AciI (SsiI) | CCGC | 8,093 | 86.92% | 13.10% | 17.40% |
HpyCH4IV | ACGT | 5,261 | 56.50% | 2.88% | 6.60% |
BstuI | CGCG | 7,154 | 76.83% | 9.14% | NA |