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Table 1 Between-methods clustering agreement measured by RAND index in irradiated treatment and bystander response.

From: Time-series clustering of gene expression in irradiated and bystander fibroblasts: an application of FBPA clustering

IRRADIATED

 

Manually curated

Microarray FBPA

qRT-PCR FBPA

Microarray STEM

qRT-PCR STEM

Manually curated

1

0.622

0.607

0.640

0.486

Microarray FBPA

 

1

0.681

0.596

0.533

qRT-PCR FBPA

  

1

0.706

0.615

Microarray STEM

   

1

0.644

qRT-PCR STEM

    

1

BYSTANDER

 

Manually curated

Microarray FBPA

qRT-PCR FBPA

Microarray STEM

qRT-PCR STEM

Manually curated

1

0.745

0.661

0.742

0.483

Microarray FBPA

 

1

0.742

0.671

0.561

qRT-PCR FBPA

  

1

0.643

0.615

Microarray STEM

   

1

0.490

qRT-PCR STEM

    

1

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BMC Genomics

ISSN: 1471-2164

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