Trait, QTL number and QTL interaction | Chrom. | QTL peak position | 2-LOD confidence interval | Morphological and/or cloned genes within 2 LOD conf. interval | LOD | Additive effect | R2* | LOD threshold | MIM R2** | H2 |
---|---|---|---|---|---|---|---|---|---|---|
Final leaf number | Â | Â | Â | Â | Â | Â | 2.8 | 0.41 | 0.87 | |
1 | 1H | 175 | (170-175) | Â | 6.2 | -0.9 | 0.18 | Â | Â | Â |
2 | 4H | 123 | (120-123) | VRN-H2 | 2.9 | 0.6 | 0.08 | Â | Â | Â |
3 | 5H | 154 | (148-156) | VRN-H1 | 2.8 | -0.6 | 0.07 | Â | Â | Â |
4 | 7H | 27 | Â | Â | 2.7 | 0.6 | 0.07 | Â | Â | Â |
Plant height | Â | Â | Â | Â | Â | Â | 2.8 | 0.78 | 0.94 | |
1 | 1H | 144 | (133-158) | Â | 6.5 | -6.5 | 0.06 | Â | Â | Â |
2 | 2H | 122 | (119-128) | ZEO1 | 31.0 | -21.7 | 0.64 | Â | Â | Â |
3 | 3H | 57 | (51-73) | Â | 5.6 | 6.0 | 0.05 | Â | Â | Â |
4 | 6H | 112 | (103-121) | Â | 5.7 | 5.9 | 0.05 | Â | Â | Â |
Spike number | Â | Â | Â | Â | Â | Â | 2.7 | 0.56 | 0.63 | |
1 | 2H | 57 | (50-64) | VRS1 | 11.4 | 3.6 | 0.40 | Â | Â | Â |
2 | 5H | 9 | (2-24) | Â | 3.8 | -1.8 | 0.06 | Â | Â | Â |
3 | 6H | 91 | (85-98) | Â | 3.6 | 1.2 | 0.05 | Â | Â | Â |
1 Ă— 2 | Â | Â | Â | Â | Â | -1.5 | 0.06 | Â | Â | Â |
Spike length | Â | Â | Â | Â | Â | Â | 2.9 | 0.92 | 0.98 | |
1 | 1H | 175 | (158-175) | Â | 4.9 | -0.5 | 0.00 | Â | Â | Â |
2 | 2H | 122 | (120-127) | ZEO1 | 42.9 | -3.1 | 0.82 | Â | Â | Â |
3 | 3H | 20 | (7-34) | Â | 5.1 | -0.5 | 0.04 | Â | Â | Â |
4 | 5H | 105 | Â | Â | 2.4 | -0.2 | 0.01 | Â | Â | Â |
5 | 6H | 106 | Â | Â | 2.7 | 0.3 | 0.02 | Â | Â | Â |
1 Ă— 2 | Â | Â | Â | Â | Â | 0.4 | 0.04 | Â | Â | Â |
Floret number | Â | Â | Â | Â | Â | Â | 2.8 | 0.89 | 0.97 | |
1 | 1H | 175 | (157-1175) | Â | 7.5 | -5.3 | 0.05 | Â | Â | Â |
2 | 2H | 57 | (54-61) | VRS1 | 38.6 | -21.4 | 0.77 | Â | Â | Â |
3 | 3H | 39 | (30-45) | Â | 3.2 | -3.2 | 0.02 | Â | Â | Â |
4 | 4H | 123 | (117-123) | Â | 3.1 | 3.2 | 0.02 | Â | Â | Â |
5 | 6H | 103 | (66-120) | Â | 4.8 | 3.9 | 0.03 | Â | Â | Â |
Grain number | Â | Â | Â | Â | Â | Â | 3.0 | 0.75 | 0.92 | |
1 | 1H | 169 | (162-174) | Â | 3.8 | -5.0 | 0.01 | Â | Â | Â |
2 | 2H | 56 | (53-62) | VRS1 | 18.7 | -12.4 | 0.47 | Â | Â | Â |
3 | 2H | 122 | (116-130) | ZEO1 | 10.3 | -7.2 | 0.18 | Â | Â | Â |
1 Ă— 2 | Â | Â | Â | Â | Â | 2.9 | 0.04 | Â | Â | Â |
2 Ă— 3 | Â | Â | Â | Â | Â | 3.3 | 0.05 | Â | Â | Â |
Hundred grain weight | Â | Â | Â | Â | Â | 2.8 | 0.66 | 0.78 | ||
1 | 2H | 57 | (54-62) | VRS1 | 19.8 | 0.5 | 0.54 | Â | Â | Â |
2 | 6H | 66 | (56-70) | Â | 3.5 | -0.1 | 0.04 | Â | Â | Â |
3 | 7H | 104 | (86-130) | Â | 3.9 | 0.2 | 0.05 | Â | Â | Â |
Gain yield | Â | Â | Â | Â | Â | Â | 2.8 | 0.30 | 0.49 | |
1 | 1H | 175 | (170-175) | Â | 3.5 | -2.8 | 0.11 | Â | Â | Â |
2 | 2H | 122 | (112-131) | ZEO1 | 6.2 | -3.7 | 0.19 | Â | Â | Â |