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Table 2 Sequence divergence between the MED and MEAM1 cryptic species

From: Transcriptome analysis and comparison reveal divergence between two invasive whitefly cryptic species

    

% Differences

  
 

% CpG

% GC

Loci

Mean

SE

Compared

kb

ts/tve

5' UTRsa

6.3

37.12

188

    

   All

   

1.66

0.153

21.11

1.41

   No CpG

   

1.46

0.141

19.78

1.28

   CpG

   

5.29

0.775

1.33

2.32

CDSb

6.57

42.84

3585

    

   All

   

0.83

0.014

1730.64

3.07

   No CpG

   

0.61

0.011

1616.93

2.6

   CpG

   

3.99

0.818

113.71

4.59

nd sitesc

5.72

43.62

3585

    

   All

   

0.2

0.007

1024.65

1.34

   No CpG

   

0.18

0.007

966.05

1.2

   CpG

   

0.58

0.051

58.6

2.63

4d sitesd

11.03

37.2

3585

    

   All

   

2.68

0.051

238.02

2.38

   No CpG

   

1.73

0.041

211.77

1.69

   CpG

   

12.16

0.332

26.25

3.94

3' UTRs

3.74

35.19

286

    

   All

   

1.43

0.114

43.1

1.56

   No CpG

   

1.1

0.102

41.48

1.36

   CpG

   

7.32

0.848

1.61

3.18

  1. aUTRs: untranslated regions.
  2. bCDS: coding sequence.
  3. cnd sites: non-degenerative sites.
  4. d4d sites: fourfold-degenerate sites where no changes cause any amino acid replacement.
  5. ets/tv: ration of transitions (ts) over transversions (tv).