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Table 8 Summary of microsatellite markers identification from the all catfish expressed short reads assembly

From: Generation of genome-scale gene-associated SNPs in catfish for the construction of a high-density SNP array

Number of contigs of sequences surveyed

526,099

Number of contigs containing microsatellites

49,883

Total number of microsatellites identified

57,379

   Di-nucleotide repeats

31,657

   Tri-nucleotide repeats

16,925

   Tetra-nucleotide repeats

8,235

   Penta-nucleotide repeats

506

   Hexa-nucleotide repeats

56

Number of microsatellites with sufficient flanking sequences

39,516

Number of contigs containing microsatellites with sufficient flanking sequences

34,539