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Table 1 Summary of RNA consensus contig results

From: Characterization of RNase MRP RNA and novel snoRNAs from Giardia intestinalis and Trichomonas vaginalis

 

G. intestinalis

1

G. intestinalis

2

T. vaginalis

1

T. vaginalis

2

Mapping software

Maq

Bowtie

Maq

Bowtie

Consensus calling

Maq-assemble

mpileup*

Maq-assemble

mpileup*

Number of Contigs

7051

6521

18310

3787

Mean length (nt)

45

92

42

100

Median length (nt)

36

68

36

79

Max length (nt)

439

6017

352

522

  1. *mpileup is part of the SAMTOOLS package