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Figure 1 | BMC Genomics

Figure 1

From: Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

Figure 1

Characteristics of nonsynonymous SNPs. (A) Distribution of "alignment score change" for Holstein and Black Angus nonsynonymous SNPs generated using a bin size of 3. Negative scores indicate the presence of a non-reference-sequence allele that makes the protein less similar to its orthologues. Positive scores indicate the presence of a non-reference-sequence allele that makes the protein more similar to its orthologues. (B) Proportion of heterozygous SNPs in each bin. SNPs with negative scores tend to be heterozygous. (C) Proportion of SNPs found in the other animal's SNP list. SNPs with negative scores are less frequently present in both animals.

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