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Table 2 Oligonucleotide primers used for the amplification of C. jejuni genes

From: Closely related Campylobacter jejuni strains from different sources reveal a generalist rather than a specialist lifestyle

Gene

Primers

Sequence (5'-3')

Tma

Reference

Cj0977

Cj0977_F1

Cj0977_R1

TGAAGCACCCAAAAGAGTTTATATACG

TTTCTGGATGTTTTGTAAATGAAAG

59

This study

fspA1

CjfspA1_F1

CjfspA1_R1

ATGTCGATTTAGTGTAATATATAT

TAATCAGGCTTGGTGGCTTTGG

53

This study

fspA2

CjfspA2_F1

CjfspA2-RT04

AAACCGATAACAATATAAATTAATTTAAAAAG

AAGCCTCTAATGCGGGATTT

53

This study [33]

CjflaA

Fla4F

Fla1728R

GGATTTCGTATTAACACAAATGGTGC

CTGTAGTAATCTTAAAACATTTTG

55

[63]

FlaC

CjflaC_F1

CjflaC_R1

CTAATACCATAATTGAACTCC

TTCTACTATACCTTGATCAAAAAG

51

This study

neuC1

CjneuC1_F1

CjneuC1_R1

GGTGATAGAGTGGAGCCTTTAGCTG

GTCAGTTCTACCATCTTGTCTTGAACC

49

[32]

cadF

CjcadF_F2B

CjcadF_R1B

TTGAAGGTAATTTAGATATG

CTAATACCTAAAGTTGAAAC

45

[64]

cdtB

CjcdtB_F

CjcdtB_R

GTTGGCACTTGGAATTTGCAAGGC

GTTAAAATCCCCTGCTATCAACCA

60

[65]

cgtB

DL39

cgtBrev

TTAAGAGCAAGATATGAAGGTG

GCACATAGAGAACGCTACAA

53

[66]

ciaB

CjCiaB-F

CjCiaB-R

CTATGCTAGCCATACTTAGGC

GCCCGCCTTAGAACTTAC

51

[67]

pglB

pglBf

pglBr

ACTTGGTGGGATTATGGTTATCCTG

TCACGAGTTTTTGGTGTATCGATTTT

60

[68]

ggt

IF50

IF100

GGG TAA ATA AGA AGT TAG AAT TC

CTT GAT AAA GGC GGA AAT GCC

55

[69]

ggt

Cjggt_fw1

Cjggt_rv1

TTTTAGCCATATCCGCTGCT

AGCTGGAGTACCAGGAA

49

[12]

ggt

Cjggt_fw2

Cjggt_rv1

AAATAGCTTGGTATTGTGCT

AGCTGGAGTACCAGGAA

49

This study

ansB perip.b

ansB_fw3_deg

ansB_rv1

TWTYTATAGGAGYATGTA

CAA ATA AAG CTT TTG CAG C

51

This study

ansB

secr.b

ansB_fw2

ansB_rv1

CAA AAT AAG GGG AGA ATT GTG

CAA ATA AAG CTT TTG CAG C

49

This study

flpA

CjflpA_fw1

CjflpA_rv1

CTGGTACTAAGTATCGTTATA

AAGGAAGCTTGAGCTCGTA

51

This study

tlp7

tlp7-F01

tlp7-R01

AGGTTTCTGCTGCAATTTTTGTGGTG

AGCAAGTTCTCCAAGTTCATTGCCA

60

[18]

dmsA

dmsA_F

dmsA_R

GATAGGGCATTGCGATGAGT

CTTGCTAGCCCAATCAGGAG

55

[12]

Cj1585

Cj1585c_F

Cj1585c_R

TGTTGTGGGTTTGCTGGATA

TTGCTTCACTGCATTCATCC

53

[12]

capA

CjcapA_F

CjcapA_R

TGAATCGAAGTGGAAAAATAGAAG

CCCATTTTTGTATCTTCATAACCT

60

[70]

fucP

CjfucP_F1

CjfucP_R1

CTTCATATTAGCCAGCATGA

CCATATTAGCTACCAATGCA

51

This study

  1. a annealing temperature in °Celsius;b perip. = periplasmic; secr. = secreted