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Table 1 Structural quality assessment of wild-type β-mannosidase models

From: A comparative structural bioinformatics analysis of inherited mutations in β-D-Mannosidase across multiple species reveals a genotype-phenotype correlation

Models

Results of the tests performed

 

RMSD (calculated by PyMOL) (Å)

PROCHECK (ramachandran plot statistics)

Verified3D (Z-Score)

Energy (reported by Modeller) (kcal/mol)

PDB validation (deviations from ideal geometry)

  

Residues in most favored regions

Residues in allowed regions

  

Bond angles (degree)

Bond lengths (Å)

Cow

0.292

86.5%

10.8%

-1.61

11577.25

3.3

0.021

Goat

0.280

87.8%

8.2%

-1.61

8713.15

3.5

0.020

Human

0.295

85.7%

9.9%

-1.44

9281.74

3.2

0.021

Mouse

0.295

92.1%

7.1%

-1.28

8503.92

3.3

0.021