Skip to main content

Table 1 Samples' read alignment information.

From: Annotation of primate miRNAs by high throughput sequencing of small RNA libraries

Individual

Tissue

Genome

miRBase miRNAs

Predictions

Unknown

Total reads

Chimp 1

Brain

42.3

78.8

2.9

18.3

12211879

Chimp 2

Brain

54.3

90

2.2

7.7

11658357

Chimp 3

Brain

54.8

73.5

2.4

24.2

8627942

Chimp 4

Brain

52.5

88.1

2.3

9.6

10381037

Chimp 5

Brain

18.7

79.4

2.2

18.4

13977547

Chimp 1

Liver

57.4

92.3

1.1

6.6

8262666

Chimp 2

Liver

63.9

89.3

0.9

9.8

8088806

Chimp 3

Liver

51.7

88.1

0.9

11

11017642

Chimp 4

Liver

52.3

93.8

1.1

5.1

10449677

Chimp 5

Liver

29.9

57.5

0.5

41.9

16283995

Chimp 2

Testis

49.1

4.2

1.6

94.2

11361816

Chimp 3

Testis

63

5.8

2.1

92

8899032

Chimp 4

Testis

40.7

8.6

3.4

88

11965804

Chimp 5

Testis

43.2

5.8

2.1

92.1

11875495

Chimp 6

Testis

51.3

6.8

4

89.2

11166737

Chimp 1

Kidney

60.3

91

2.8

6.2

9702033

Chimp 2

Kidney

44.5

83.3

2.8

13.9

7774225

Chimp 3

Kidney

61.6

86.4

3.4

10.2

10250184

Chimp 5

Kidney

57.9

83.4

3.6

12.9

10264521

Chimp 1

Heart

63.2

94.7

2.2

3.1

7818504

Chimp 2

Heart

63.6

96.4

1.5

2

8644295

Chimp 3

Heart

65.4

95.3

1.1

3.6

9426585

Chimp 4

Heart

61.3

88

1.6

10.5

9449302

Chimp 5

Heart

60.8

88

1.3

10.7

9124991

Rhesus 1

Brain

36.1

72.3

4.8

23

12946219

Rhesus 2

Brain

38

81.8

4.5

13.7

12258382

Rhesus 3

Brain

47.5

82.3

5.6

12.1

11623674

Rhesus 4

Brain

44.9

90.6

3.6

5.8

11490940

Rhesus 5

Brain

48.9

88.4

3.8

7.8

10898842

Rhesus 1

Liver

51.4

93.4

1.3

5.4

8615049

Rhesus 2

Liver

58.2

95.1

1.1

3.8

8617533

Rhesus 3

Liver

54.7

95

2

3

9668109

Rhesus 4

Liver

45.6

94.6

1.8

3.7

10620490

Rhesus 5

Liver

34.5

90.6

1.9

7.5

10750399

Rhesus 1

Testis

44.4

36.3

1.1

62.5

12068068

Rhesus 2

Testis

25.7

40.2

2.7

57

14533174

Rhesus 3

Testis

47

29.9

1.1

69.1

11467601

Rhesus 4

Testis

50.5

15.2

0.4

84.3

10760301

Rhesus 1

Kidney

39.5

59.4

1.3

39.2

10730625

Rhesus 2

Kidney

52.4

87.9

2.4

9.6

12158274

Rhesus 3

Kidney

58.5

86.5

2.8

10.7

10683932

Rhesus 4

Kidney

55.8

81.5

2.3

16.2

10704780

Rhesus 6

Kidney

57.8

86.3

2.4

11.3

10530708

Rhesus 1

Heart

57.8

92.9

1.1

5.9

9116454

Rhesus 2

Heart

24.8

52.9

0.6

46.5

19394080

Rhesus 3

Heart

61.9

96.7

0.8

2.5

9093491

Rhesus 4

Heart

57.8

90.8

1.2

8

9824696

Rhesus 5

Heart

66.8

95

1.1

3.9

9018713

Orang 1

Brain

42.5

78.6

0.6

20.8

11307562

Orang 2

Brain

40.7

64.7

0.2

35

11449064

Orang 3

Liver

53.4

91.7

0.2

8.1

7111233

Orang 4

Liver

38.8

91.3

0.1

8.5

10302589

Gorilla 1

Brain

41.5

6.7

56.4

37

11931502

Gorilla 2

Brain

37.6

3.2

32.6

64.3

9534826

Gorilla 3

Liver

35

1.8

72.8

25.4

12400172

Gorilla 4

Liver

38.8

2.4

61.2

36.4

12018826

  1. Column 1: individual information; column 2: tissue; column 3: fraction of reads that could be mapped perfectly to species corresponding genome; columns 4-6 are based on the reads that could be mapped to the corresponding species genome and contain how many of these reads could be aligned to known miRNAs (column 4), newly predicted miRNAs (column 5) and to neither of these 2 categories (column 6); column 7: total number of sequenced reads.