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Table 3 Novel miRNAs

From: Annotation of primate miRNAs by high throughput sequencing of small RNA libraries

species

miRBase id

mature sequence

chromosome

miRDeep2 score

chimpanzee

ptr-mir-4423

AUAGGCACCAAAAAGCAACAA

1

24.7

chimpanzee

ptr-mir-3121

UAAAUAGAGUAGGCAAAGGACA

1

25919

chimpanzee

ptr-mir-3117

AUAGGACUCAUAUAGUGCCAGG

1

4.2

chimpanzee

ptr-mir-4742

UCAGGCAAAGGGAUAUUUACAGA

1

4.7

chimpanzee

ptr-mir-4428

CAAGGAGACGGGAACAUGGAGCC

1

5.2

chimpanzee

ptr-mir-4654

UGUGGGAUCUGGAGGCAUCUGGG

1

5.7

chimpanzee

ptr-mir-92b

UAUUGCACUCGUCCCGGCCUCC

1

9795.4

chimpanzee

ptr-mir-3127

AUCAGGGCUUGUGGAAUGGGAAG

2A

103.7

chimpanzee

ptr-mir-3132

UGGGUAGAGAAGGAGCUCAGA

2B

5.5

chimpanzee

ptr-mir-3129

GCAGUAGUGUAGAGAUUGGU

2B

92.4

chimpanzee

ptr-mir-378b

ACUGGACUUGGAGGCAGAAA

3

5.2

chimpanzee

ptr-mir-4446

CAGGGCUGGCAGUGAGAUGGG

3

5.3

chimpanzee

ptr-mir-3136

CUGACUGAAUAGGUAGGGUCA

3

5.5

chimpanzee

ptr-mir-3138

ACAGUGAGGUAGAGGGAGUG

4

148.4

chimpanzee

ptr-mir-3660

ACUGACAGGAGAGCGUUUUGA

5

120.4

chimpanzee

ptr-mir-378e

ACUGGACUUGGAGUCAGG

5

5

chimpanzee

ptr-mir-449c

AGGCAGUGUAUUGCUAGCGGCUGU

5

5.4

chimpanzee

ptr-mir-3943

UAGCCCCCAGGCUUCACUUGGCG

7

47.7

chimpanzee

ptr-mir-4660

UGCAGCUCUGGUGGAAAAUGGA

8

45124

chimpanzee

ptr-mir-3151

GGUGGGGCAAUGGGAUCAGGUG

8

500.7

chimpanzee

ptr-mir-3149

UUUGUAUGGAUAUGUGUGUGUA

8

5.3

chimpanzee

ptr-mir-4667

ACUGGGGAGCAGAAGGAGAACC

9

5.5

chimpanzee

ptr-mir-548e

AAAAACUGCGACUACUUUUG

10

5.4

chimpanzee

ptr-mir-3664

UCAGGAGUAAAGACAGAGU

11

5.6

chimpanzee

ptr-mir-1260b

AUCCCACCACUGCCACCAU

11

5.8

chimpanzee

ptr-mir-3165

AGGUGGAUGCAAUGUGACCUCA

11

5.9

chimpanzee

ptr-mir-1252

AGAAGGAAGUUGAAUUCAUU

12

4.6

chimpanzee

ptr-mir-200c

UAAUACUGCCGGGUAAUGAUGGA

12

5.8

chimpanzee

ptr-mir-655

AUAAUACAUGGUUAACCUCUU

14

246.1

chimpanzee

ptr-mir-3173

AAAGGAGGAAAUAGGCAGGCCA

14

344.5

chimpanzee

ptr-mir-2392

UAGGAUGGGGGUGAGAGGUG

14

5

chimpanzee

ptr-mir-4504

UGUGACAAUAGAGAUGAACAUGG

14

5.8

chimpanzee

ptr-mir-4510

UGAGGGAGUAGGAUGUAUGGU

15

4.2

chimpanzee

ptr-mir-4524a

UGAGACAGGCUUAUGCUGCUA

17

195.8

chimpanzee

ptr-mir-4743

UGGCCGGAUGGGACAGGAGGCA

18

5.4

chimpanzee

ptr-mir-320e

AAAAGCUGGGUUGAGAAGGUGA

19

4.5

chimpanzee

ptr-mir-548o

AAAAGUAAUUGCGGUUUUUGCC

20

105.8

chimpanzee

ptr-mir-3193

CUCCUGCGUAGGAUCUGAGGAG

20

4.7

chimpanzee

ptr-mir-3192

UCUGGGAGGUUGUAGCAGUGGA

20

5

chimpanzee

ptr-mir-3200

CACCUUGCGCUACUCAGGUCUG

22

270.9

chimpanzee

ptr-mir-23c

AUCACAUUGCCAGUGAUUACCC

X

4.4

chimpanzee

ptr-mir-2114

CGAGCCUCAAGCAAGGGACUUCA

X

50.6

chimpanzee

ptr-mir-767

UGCACCAUGGUUGUCUGAGCA

X

5.3

chimpanzee

ptr-mir-4536

UGUGGUAGAUAUAUGCACGA

X

5.3

chimpanzee

ptr-mir-222

AGCUACAUCUGGCUACUGGGUC

X

5.6

chimpanzee

ptr-mir-3937

ACAGGCGGCUGUAGCAAUGGGGGG

X

6.1

chimpanzee

ptr-mir-676

CUGUCCUAAGGUUGUUGAGU

X

79.5

gorilla

ggo-mir-135b

UAUGGCUUUUCAUUCCUAUGUGA

1

10.3

gorilla

ggo-mir-3605

GAUGAGGAUGGAUAGCAAGGAAG

1

1.1

gorilla

ggo-mir-29c

UAGCACCAUUUGAAAUCGGUUA

1

11813.8

gorilla

ggo-mir-197

UUCACCACCUUCUCCACCCAGC

1

119.9

gorilla

ggo-mir-92b

UAUUACACUCGUCCCGGCCUCC

1

1589.6

gorilla

ggo-mir-30e

UGUAAACAUCCUUGACUGGAAGC

1

3114.3

gorilla

ggo-mir-556

AUAUUACCAUUAGCUCAUCU

1

36.8

gorilla

ggo-mir-488

CCCAGAUAAUGGCACUCUCAA

1

4.7

gorilla

ggo-mir-320b

AGAAGCUGGGUUGAGAGGGCAA

1

5

gorilla

ggo-mir-190b

UGAUAUGUUUGAUAUUGGGUUG

1

5.1

gorilla

ggo-mir-429

UAAUACUGUCUGGUAAAACCG

1

5.3

gorilla

ggo-mir-760

CGGCUCUGGGUCUGUGGGGAG

1

5.4

gorilla

ggo-mir-1278

UAGUACUGUGCAUAUCAUCUA

1

5.6

gorilla

ggo-mir-551a

GCGACCCACUCUUGGUUUCCA

1

83

gorilla

ggo-mir-200b

UAAUACUGCCUGGUAAUGAUGAC

1

86.9

gorilla

ggo-mir-200a

UAACACUGUCUGGUAACGAUGU

1

99.7

gorilla

ggo-mir-4429

AAAAGCUGGGCUGAGAGGCGA

2A

1

gorilla

ggo-mir-3126

UGAGGGACAGAUGCCAGAAGCA

2A

5.3

gorilla

ggo-mir-1301

UUGCAGCUGCCUGGGAGUGACU

2A

5.5

gorilla

ggo-mir-3127

AUCAGGGCUUGUGGAAUGGGA

2A

5.6

gorilla

ggo-mir-26b

UUCAAGUAAUUCAGGAUAGGU

2B

15749.2

gorilla

ggo-mir-375

UUUGUUCGUUCGGCUCGCGUGA

2B

1.7

gorilla

ggo-mir-128

UCACAGUGAACCGGUCUCUU

2B

22571.1

gorilla

ggo-mir-149

UCUGGCUCCGUGUCUUCACUCCC

2B

357.8

gorilla

ggo-mir-3129

GCAGUAGUGUAGAGAUUGGU

2B

4

gorilla

ggo-mir-191

CAACGGAAUCCCAAAAGCAGC

3

13047.6

gorilla

ggo-let-7g

UGAGGUAGUAGUUUGUACAGU

3

134084.7

gorilla

ggo-mir-3923

AACUAGUAAUGUUGGAUUAGGGC

3

1.5

gorilla

ggo-mir-28

CACUAGAUUGUGAGCUCCUGGA

3

-4.8

gorilla

ggo-mir-4446

CAGGGCUGGCAGUGAGAUGGG

3

5.2

gorilla

ggo-mir-378b

ACUGGACUUGGAGGCAGAAAG

3

5.2

gorilla

ggo-mir-885

AGGCAGCGGGGUGUAGUGGA

3

5.7

gorilla

ggo-mir-551b

GCGACCCAUACUUGGUUUCAG

3

74.8

gorilla

ggo-mir-1255a

AGGAUGAGCAAAGAAAGUAGAU

4

122.2

gorilla

ggo-mir-548d

CAAAAACUGCAGUUACUUUUG

4

17.8

gorilla

ggo-mir-577

AUAGAUAAAAUAUUGGUACCUG

4

1.8

gorilla

ggo-mir-3138

ACAGUGAGGUAGAGGGAGUG

4

2.3

gorilla

ggo-mir-574

CACGCUCAUGCACACACCCACA

4

510.5

gorilla

ggo-mir-378e

ACUGGACUUGGAGUCAGGAC

5

0.5

gorilla

ggo-mir-3615

UCUCUCCGCUCCUCGCGGCUCGC

5

11.9

gorilla

ggo-mir-423

UGAGGGGCAGAGAGCGAGACUU

5

12767.2

gorilla

ggo-mir-4524a

UGAGACAGGCUUAUGCUGCUA

5

150

gorilla

ggo-mir-338

UCCAGCAUCAGUGAUUUUGUUGA

5

1509.7

gorilla

ggo-mir-193a

AACUGGCCUACAAAGUCCCAG

5

1740.8

gorilla

ggo-mir-1180

UUUCCGGCUCGCGUGGGUGUG

5

1.9

gorilla

ggo-mir-144

GGAUAUCAUCAUAUACUGUAAG

5

245.3

gorilla

ggo-mir-454

UAGUGCAAUAUUGCUUAUAGGGUU

5

4.9

gorilla

ggo-mir-152

UCAGUGCAUGACAGAACUUGG

5

5070.4

gorilla

ggo-mir-146a

UGAGAACUGAAUUCCAUGGGU

5

5.2

gorilla

ggo-mir-874

CUGCCCUGGCCCGAGGGACCGA

5

526.7

gorilla

ggo-mir-142

CCCAUAAAGUAGAAAGCACUA

5

5.3

gorilla

ggo-mir-1250

ACGGUGCUGGAUGUGGCCUU

5

5.4

gorilla

ggo-mir-4738

UGAAACUGGAGCGCCUGGAG

5

5.5

gorilla

ggo-mir-584

UUAUGGUUUGCCUGGGACUGA

5

5.8

gorilla

ggo-mir-1271

CUUGGCACCUAGCAAGCACUCA

5

58.5

gorilla

ggo-mir-378

ACUGGACUUGGAGUCAGAAGGCC

5

7592.3

gorilla

ggo-mir-340

UUAUAAAGCAAUGAGACUGAU

5

8919.2

gorilla

ggo-mir-877

GUAGAGGAGAUGGCGCAGGGGACA

6

1.5

gorilla

ggo-mir-30c

UGUAAACAUCCUACACUCUCAGC

6

1740.7

gorilla

ggo-mir-548b

CAAAAACCUCAGUUGCUUUUG

6

17.9

gorilla

ggo-mir-548a

AAAAGUAAUUGUGGUUUUUGC

6

30.4

gorilla

ggo-mir-133b

UUUGGUCCCCUUCAACCAGC

6

4

gorilla

ggo-mir-206

UGGAAUGUAAGGAAGUGUGUGG

6

5.4

gorilla

ggo-mir-1273c

GGCGACAAAACGAGACCCUG

6

8.4

gorilla

ggo-mir-671

UCCGGUUCUCAGGGCUCCACC

7

24.5

gorilla

ggo-mir-3943

UAGCCCCCAGGCUUCACUUGGCG

7

34

gorilla

ggo-mir-148a

UCAGUGCACUACAGAACUUUG

7

3957.5

gorilla

ggo-mir-339

UGAGCGCCUCGACGACAGAGCCG

7

429.6

gorilla

ggo-mir-592

UUGUGUCAAUAUGCGAUGAUG

7

45.6

gorilla

ggo-mir-548f

CAAAAGUGAUCGUGGUUUUUG

7

4.6

gorilla

ggo-mir-589

UGAGAACCACGUCUGCUCUGA

7

5.3

gorilla

ggo-mir-182

UUUGGCAAUGGUAGAACUCACA

7

5.4

gorilla

ggo-mir-590

GAGCUUAUUCAUAAAAGUGCAG

7

57.4

gorilla

ggo-mir-490

CAACCUGGAGGACUCCAUGCUG

7

73.8

gorilla

ggo-mir-335

UCAAGAGCAAUAACGAAAAAUG

7

785.9

gorilla

ggo-mir-486

UCCUGUACUGAGCUGCCCCGAG

8

1100

gorilla

ggo-mir-383

AGAUCAGAAGGUGAUUGUGGC

8

1642.2

gorilla

ggo-mir-3151

GGUGGGGCAAUGGGAUCAGGUG

8

18.3

gorilla

ggo-mir-598

UACGUCAUCGUUGUCAUCGUCA

8

5151.1

gorilla

ggo-mir-4660

UGCAGCUCUGGUGGAAAAUGGA

8

5.2

gorilla

ggo-mir-320a

AAAAGCUGGGUUGAGAGGGCGA

8

5.5

gorilla

ggo-mir-151a

UCGAGGAGCUCACAGUCUAG

8

5.6

gorilla

ggo-mir-455

GCAGUCCAUGGGCAUAUACAC

9

1166.5

gorilla

ggo-let-7f

UGAGGUAGUAGAUUGUAUAGU

9

1167727.6

gorilla

ggo-mir-873

GCAGGAACUUGUGAGUCUCC

9

197.5

gorilla

ggo-mir-27b

UUCACAGUGGCUAAGUUCUGC

9

2594.1

gorilla

ggo-mir-23b

AUCACAUUGCCAGGGAUUACCA

9

5

gorilla

ggo-mir-3927

CAGGUAGAUAUUUGAUAGGCA

9

6

gorilla

ggo-mir-491

AGUGGGGAACCCUUCCAUGAGGA

9

92.5

gorilla

ggo-mir-1287

UGCUGGAUCAGUGGUUCGAG

10

0.8

gorilla

ggo-mir-146b

UGAGAACUGAAUUCCAUAGGCUGU

10

10004.3

gorilla

ggo-mir-2110

UUGGGGAAGCGGCCGCUGAGUGA

10

1.4

gorilla

ggo-mir-346

UGUCUGCCCGCAUGCCUGCCUC

10

1.8

gorilla

ggo-mir-4484

GAAAAAGGCGGGAGAAGCCCCA

10

-2.5

gorilla

ggo-mir-202

AAGAGGUAUAGGGCAUGGGAAA

10

4.3

gorilla

ggo-mir-609

AGGGUGUUUCUCUCAUCUCUGG

10

4.3

gorilla

ggo-mir-548e

AAAAACUGCGACUACUUUUG

10

5.4

gorilla

ggo-mir-1296

UUAGGGCCCUGGCUCCAUCUCC

10

5.6

gorilla

ggo-mir-548c

AAAAGUACUUGCGGAUUUUG

11

12.7

gorilla

ggo-mir-34c

AGGCAGUGUAGUUAGCUGAUUG

11

1287.5

gorilla

ggo-mir-483

AAGACGGGAGGAAAGAAGGGAG

11

1967.6

gorilla

ggo-mir-4488

UAGGGGGCGGGCUCCGGCG

11

2

gorilla

ggo-mir-192

CUGACCUAUGAAUUGACAGCC

11

243338.1

gorilla

ggo-mir-34b

AGGCAGUGUCAUUAGCUGAUUG

11

28.3

gorilla

ggo-mir-210

CUGUGCGUGUGACAGCGGCUGA

11

323

gorilla

ggo-mir-675b

UGGUGCGGAGAGGGCCCACAGUG

11

41.1

gorilla

ggo-mir-139

UCUACAGUGCACGUGUCUCCAG

11

4363.3

gorilla

ggo-mir-1260b

AUCCCACCACUGCCACCA

11

5.6

gorilla

ggo-mir-326

CCUCUGGGCCCUUCCUCCAG

11

5.7

gorilla

ggo-mir-129

AAGCCCUUACCCCAAAAAGCA

11

7084.6

gorilla

ggo-mir-331

GCCCCUGGGCCUAUCCUAGAAC

12

1050.8

gorilla

ggo-mir-3612

AGGAGGCAUCUUGAGAAAUGG

12

12.5

gorilla

ggo-mir-1252

AGAAGGAAGUUGAAUUCAUU

12

16

gorilla

ggo-mir-148b

UCAGUGCAUCACAGAACUUUG

12

2086.5

gorilla

ggo-let-7i

UGAGGUAGUAGUUUGUGCUGU

12

25708.1

gorilla

ggo-mir-1228

GUGGGCGGGGGCAGGUGUGUGG

12

30.4

gorilla

ggo-mir-1291

GUGGCCCUGACUGAAGACCAGCA

12

5.3

gorilla

ggo-mir-1197

UAGGACACAUGGUCUACUUC

14

-0.3

gorilla

ggo-mir-370

GCCUGCUGGGGUGGAACCUGGUC

14

0.6

gorilla

ggo-mir-431

UGCAGGUCGUCUUGCAGGGCU

14

1

gorilla

ggo-mir-380

UAUGUAAUAUGGUCCACAUC

14

106

gorilla

ggo-mir-3545

UUGAACUGUUAAGAACCACUGG

14

12.6

gorilla

ggo-mir-433

AUCAUGAUGGGCUCCUCGGUG

14

1331

gorilla

ggo-mir-376a

AUCAUAGAGGAAAAUCCACG

14

156.3

gorilla

ggo-mir-655

AUAAUACAUGGUUAACCUCUU

14

158.8

gorilla

ggo-mir-379

UGGUAGACUAUGGAACGUAGG

14

1946

gorilla

ggo-mir-624

UAGUACCAGUACCUUGUGUUCA

14

2

gorilla

ggo-mir-409

AGGUUACCCGAGCAACUUUGCA

14

233

gorilla

ggo-mir-487a

AAUCAUACAGGGACAUCCAGU

14

245.1

gorilla

ggo-mir-495

AAACAAACAUGGUGCACUUCU

14

2528.9

gorilla

ggo-mir-543

AAACAUUCGCGGUGCACUUCU

14

260.4

gorilla

ggo-mir-432

UCUUGGAGUAGGUCAUUGGGUG

14

2631.8

gorilla

no id*1

AGGGGGAAAGUUCUAUAG

14

3.4

gorilla

ggo-mir-493

UUGUACAUGGUAGGCUUUCAU

14

38.4

gorilla

ggo-mir-889

UUAAUAUCGGACAACCAUUG

14

3.9

gorilla

ggo-mir-485

AGAGGCUGGCCGUGAUGAAU

14

3983.2

gorilla

ggo-mir-299

UGGUUUACCGUCCCACAUACA

14

446.3

gorilla

ggo-mir-494

UGAAACAUACACGGGAAACCUC

14

4.7

gorilla

ggo-mir-329b

AACACACCUGGUUAACCUCU

14

4.7

gorilla

ggo-mir-1185

AGAGGAUACCCUUUGUAUGU

14

5

gorilla

ggo-mir-496

UGAGUAUUACAUGGCCAAUC

14

5

gorilla

ggo-mir-487b

AAUCGUACAGGGUCAUCCACU

14

5.1

gorilla

ggo-mir-127

UCGGAUCCGUCUGAGCUUGGC

14

5.2

gorilla

ggo-mir-323b

CCCAAUACACGGUCGACCUC

14

5.3

gorilla

ggo-mir-337

GAACGGCUUCAUACAGGAG

14

5.3

gorilla

ggo-mir-668

AUGUCACUCGGCUCGGCCCAC

14

5.3

gorilla

ggo-mir-342

UCUCACACAGAAAUCGCACCCG

14

5.4

gorilla

ggo-mir-1193

GGGAUGGUAGACCGGUGACGUGC

14

5.4

gorilla

ggo-mir-376c

AACAUAGAGGAAAUUCCACG

14

558

gorilla

ggo-mir-3173

AAAGGAGGAAAUAGGCAGGCCAG

14

5.7

gorilla

ggo-mir-654

UGGUGGGCCGCAGAACAUGUGC

14

58.5

gorilla

ggo-mir-411

AUAGUAGACCGUAUAGCGUACG

14

587.6

gorilla

ggo-mir-656

AAUAUUAUACAGUCAACCUC

14

59.4

gorilla

ggo-mir-410

AAUAUAACACAGAUGGCCUG

14

644.2

gorilla

ggo-mir-376b

AUCAUAGAGGAAAAUCCAUG

14

71.1

gorilla

ggo-mir-377

AUCACACAAAGGCAACUUUUG

14

83.6

gorilla

ggo-mir-381

UAUACAAGGGCAAGCUCUCUG

14

86.1

gorilla

ggo-mir-345

GCUGACUCCUAGUCCAGGGCUCG

14

88.9

gorilla

ggo-mir-323a

CACAUUACACGGUCGACCUC

14

894

gorilla

ggo-mir-628

AUGCUGACAUAUUUACUAGAGG

15

141.7

gorilla

ggo-mir-1179

AAGCAUUCUUUCAUUGGUUGG

15

27.1

gorilla

ggo-mir-4510

UGAGGGAGUAGGAUGUAUGGU

15

4.7

gorilla

ggo-mir-1266

CCUCAGGGCUGUAGAACAGGGCUG

15

5.9

gorilla

ggo-mir-629

UGGGUUUAUGUUGGGAGAACU

15

78.2

gorilla

ggo-mir-1343

CUCCUGGGGCCCGCACUC

16

1

gorilla

ggo-mir-484

UCAGGCUCAGUCCCCUCCCGA

16

1.1

gorilla

ggo-mir-328

CUGGCCCUCUCUGCCCUUCCG

16

116.1

gorilla

ggo-mir-193b

CGGGGUUUUGAGGGCGAGAUGA

16

1197.1

gorilla

ggo-mir-940

AAGGCAGGGCCCCCGCUCCCC

16

1.9

gorilla

ggo-mir-138

AGCUGGUGUUGUGAAUCAGGCCG

16

3411

gorilla

ggo-mir-365a

UAAUGCCCCUAAAAAUCCUUA

16

698

gorilla

ggo-mir-140

ACCACAGGGUAGAACCACGGAC

16

97632.3

gorilla

ggo-mir-324

CGCAUCCCCUAGGGCAUUGGUG

17

550.3

gorilla

ggo-mir-497

CAGCAGCACACUGUGGUUUG

17

5.6

gorilla

ggo-mir-4520b

UUUGGACAGAAAACACGCAGG

17

5.6

gorilla

ggo-mir-887

GUGAACGGGCGCCAUCCCGAGGCU

17

81.3

gorilla

ggo-mir-22

AAGCUGCCAGUUGAAGAACUG

17

8262.6

gorilla

ggo-mir-582

UUACAGUUGUUCAACCAGUUAC

17

86.1

gorilla

ggo-mir-4529

UCAUUGGACUGCUGAUGGCCUG

18

0.8

gorilla

ggo-mir-122

UGGAGUGUGACAAUGGUGUUUG

18

2545110.2

gorilla

ggo-mir-4743

UGGCCGGAUGGGACAGGAGGCA

18

5.4

gorilla

ggo-mir-1

UGGAAUGUAAAGAAGUAUGUA

18

54001.2

gorilla

ggo-mir-517c

AUCGUGCAUCCCUUUAGAGUG

19

3

gorilla

ggo-mir-516b

AUCUGGAGGUAAGAAGCACUU

19

3.9

gorilla

ggo-mir-371b

ACUCAAAAGAUGGCGGCACUU

19

5.3

gorilla

ggo-mir-330

GCAAAGCACACGGCCUGCAGAGA

19

5.4

gorilla

ggo-mir-769

UGAGACCUCUGGGUUCUGAGC

19

545.2

gorilla

ggo-mir-125a

UCCCUGAGACCCUUUAACCUG

19

5.5

gorilla

ggo-mir-641

AAAGACAUAGGAUAGAGUCACC

19

6

gorilla

ggo-mir-181d

AACAUUCAUUGUUGUCGGUGGGU

19

6323.7

gorilla

ggo-mir-150

UCUCCCAACCCUUGUACCAGUG

19

64.7

gorilla

ggo-let-7e

UGAGGUAGGAGGUUGUAUAGU

19

86198.3

gorilla

ggo-mir-1289

UGGAAUCCAGGAAUCUGCAUUU

20

5.2

gorilla

ggo-mir-499a

UUAAGACUUGCAGUGAUGUU

20

5.5

gorilla

ggo-mir-296

AGGGUUGGGUGGAGGCUCUCC

20

6.2

gorilla

ggo-let-7c

UGAGGUAGUAGGUUGUAUGGU

21

270515.7

gorilla

ggo-mir-155

UUAAUGCUAAUCGUGAUAGGGG

21

5.3

gorilla

ggo-mir-1306

ACGUUGGCUCUGGUGGUGAUG

22

1.1

gorilla

ggo-mir-1286

UGCAGGACCAAGAUGAGCCCU

22

1.3

gorilla

ggo-let-7b

UGAGGUAGUAGGUUGUGUGGU

22

224101.1

gorilla

ggo-mir-1249

ACGCCCUUCCCCCCCUUCUUCA

22

29.3

gorilla

ggo-let-7a

UGAGGUAGUAGGUUGUAUAGU

22

523694.4

gorilla

ggo-mir-130b

CAGUGCAAUGAUGAAAGGGCA

22

548.3

gorilla

ggo-mir-185

UGGAGAGAAAGGCAGUUCCUGA

22

9137.4

gorilla

ggo-mir-18b

UAAGGUGCAUCUAGUGCAGU

X

-0.1

gorilla

ggo-mir-4536

UAUCGUGCAUAUAUCUACCACA

X

0.4

gorilla

ggo-mir-508

ACUGUAGCCUUUCUGAGUAGA

X

0.7

gorilla

ggo-mir-374b

AUAUAAUACAACCUGCUAAGUG

X

1006.8

gorilla

ggo-mir-532

CAUGCCUUGAGUGUAGGACCG

X

1105.2

gorilla

ggo-mir-542

UGUGACAGAUUGAUAACUGAAA

X

121

gorilla

ggo-mir-450b

UUUUGCAAUAUGUUCCUGAAUA

X

16

gorilla

ggo-mir-502a

AAUGCACCUGGGCAAGGAUUCA

X

164

gorilla

ggo-mir-503

UAGCAGCGGGAACAGUUCUGCAG

X

180.3

gorilla

ggo-mir-504

GACCCUGGUCUGCACUCUA

X

2

gorilla

ggo-mir-188

CAUCCCUUGCAUGGUGGAGGGUG

X

20.1

gorilla

ggo-mir-424

CAGCAGCAAUUCAUGUUUUGA

X

2017.9

gorilla

ggo-mir-509

UACUGCAGACGUGGCAAUCAUG

X

20.9

gorilla

ggo-mir-660

UACCCAUUGCAUAUCGGAGUUG

X

247.5

gorilla

ggo-mir-652

AAUGGCGCCACUAGGGUUGUG

X

291.5

gorilla

ggo-mir-363

AAUUGCACGGUAUCCAUCUGUAA

X

362.8

gorilla

ggo-mir-676

CUGUCCUAAGGUUGUUGAGUUG

X

4

gorilla

ggo-mir-374a

CUUAUCAGAUUGUAUUGUAAU

X

414.8

gorilla

ggo-mir-105

CCACGGAUGUUUGAGCAUGUG

X

-4.4

gorilla

ggo-mir-23c

AUCACAUUGCCAGUGAUUACCC

X

4.4

gorilla

ggo-mir-421

AUCAACAGACAUUAAUUGGGCG

X

5

gorilla

ggo-mir-20b

CAAAGUGCUCAUAGUGCAGGUAG

X

5

gorilla

ggo-mir-651

UUUAGGAUAAGCUUGACUUUUG

X

5

gorilla

ggo-mir-452

AACUGUUUGCAGAGGAAACUGA

X

5.2

gorilla

ggo-mir-767

UGCACCAUGGUUGUCUGAGCA

X

5.3

gorilla

ggo-mir-502b

AUGCACCUGGGCAAGGAUUCUGA

X

5.3

gorilla

ggo-mir-505

GUCAACACUUGCUGGUUUCC

X

5.4

gorilla

ggo-mir-1298

UUCAUUCGGCUGUCCAGAUG

X

5.4

gorilla

ggo-mir-222

AGCUACAUCUGGCUACUGGGUC

X

5.6

gorilla

ggo-mir-361

UUAUCAGAAUCUCCAGGGGUAC

X

615.7

gorilla

ggo-mir-450a

UUUUGCGAUGUGUUCCUAAUA

X

69.1

gorilla

ggo-mir-448

UUGCAUAUGUAGGAUGUCCCA

X

70

gorilla

ggo-mir-362

AACACACCUAUUCAAGGAUUCA

X

70.8

gorilla

ggo-mir-766

ACUCCAGCCCCACAGCCUCAGC

X

72.8

gorilla

ggo-mir-1264

ACAAGUCUUAUUUGAGCACCUG

X

7.8

gorilla

ggo-mir-1277

UACGUAGAUAUAUAUGUAUUU

X

93.5

orangutan

ppy-mir-4427

UCUGAAUAGAGUCUGAAGAG

1

0.2

orangutan

ppy-mir-3121

UAAAUAGAGUAGGCAAAGGACA

1

1.2

orangutan

ppy-mir-1976

CUCCUGCCCUCCUUGCUGUAG

1

3.8

orangutan

ppy-mir-4774

UCUGGUAUGUAGUAGGUAAUAA

2B

2.1

orangutan

ppy-mir-4782

UUCUGGAUAUGAAGACAAUCA

2B

3.2

orangutan

ppy-mir-4791

UGGAUAUGAUGACUGAAA

3

0.8

orangutan

ppy-mir-4446

CAGGGCUGGCAGUGAGAUGGG

3

2829

orangutan

ppy-mir-4796

UAAAGUGGCAGAGUAUAGACACA

3

3.3

orangutan

ppy-mir-378b

ACUGGACUUGGAGGCAGAAAG

3

5.3

orangutan

ppy-mir-4788

ACGGACCAGCUAAGGGAGGCAU

3

5.9

orangutan

ppy-mir-3938

AAUUCCCUUGUAGAUAACCUGG

3

8.5

orangutan

ppy-mir-4798

UUCGGUAUACUUUGUGAAUUGG

4

11.1

orangutan

ppy-mir-4451

UGGUAGAGCUGAGGACAG

4

4.6

orangutan

ppy-mir-3661

UGACCUGGGACUCGGAUAGCUGC

5

1.5

orangutan

ppy-mir-548h

AAAAGUAAUUGCGGUUUUUG

5

23.7

orangutan

ppy-mir-4637

UACUAACUGCAGAUUCAAGUGA

5

3

orangutan

ppy-mir-378e

ACUGGACUUGGAGUCAGG

5

4.1

orangutan

ppy-mir-3912

UAACGCAUAAUAUGGACAUG

5

4.5

orangutan

ppy-mir-548f

CAAAAACUGUAAUUACUUUUG

5

5.1

orangutan

ppy-mir-3660

CACUGACAGGAGAGCAUUUUGA

5

5.3

orangutan

ppy-mir-548a

AAAAGUAAUUGUGGUUUUUG

6

4.9

orangutan

ppy-mir-1273e

GAGGCAGGAGAAUCGCUUG

6

5

orangutan

ppy-mir-3934

UCAGGUGUGGAAUCUGAGGCA

6

5.3

orangutan

ppy-mir-3145

AACUCCAAGCAUUCAAAACUCA

6

5.4

orangutan

ppy-mir-3943

UAGCCCCCAGGCUUCACUUGGCG

7

22.2

orangutan

ppy-mir-4667

UGACUGGGGAGCAGAAGGAGA

9

1.6

orangutan

ppy-mir-3154

CAGAAGGGGAGUUGGGAGCAG

9

1.9

orangutan

ppy-mir-4672

ACACAGCUGGACAGAGGGACGA

9

4.8

orangutan

ppy-mir-2861

GGCGGCGGGCGUCGGGCG

9

6

orangutan

ppy-mir-2278

GAGGGCAGUGUGUGUUGUGUGG

9

8.8

orangutan

ppy-mir-4484

AAAAAGGCGGGAGAAGCCCCG

10

3.9

orangutan

ppy-mir-548e

AAAACGGUGACUACUUUUGCA

10

4.8

orangutan

ppy-mir-202

UUCCUAUGCAUAUACUUCUU

10

49.7

orangutan

ppy-mir-3155a

CAGGCUCUGCAGUGGGAACGGA

10

6.1

orangutan

ppy-mir-548c

AAAAGUACUUGCGGAUUUUG

11

5

orangutan

ppy-mir-1260b

AUCCCACCACUGCCACCA

11

5.5

orangutan

ppy-mir-3170

CUGGGGUUCUGAGACAGACAG

13

2.4

orangutan

ppy-mir-151b

UCCAGGAGCUCACAGUCUAG

14

2.6

orangutan

ppy-mir-1193

GGGAUGGUAGACCGGUGACGUGC

14

5

orangutan

ppy-mir-3173

AAGGAGGAAAUAGGCAGGCCAG

14

5.8

orangutan

ppy-mir-3174

UAGUGAGUUAGAGAUGCAGAGC

15

1.7

orangutan

ppy-mir-4515

AGGACUGGACUCCCGGCGGC

15

2.9

orangutan

ppy-mir-10a

UACCCUGUAGAUCCGAAUUUG

17

4.3

orangutan

ppy-mir-454

UAGUGCAAUAUUGCUUAUAGGG

17

5

orangutan

ppy-mir-4520a

UGGACAGAAAACACGCAGGAAG

17

5.2

orangutan

ppy-mir-152

UCAGUGCAUGACAGAACUUGG

17

8232.8

orangutan

ppy-mir-4526

GCUGACAGCAGGGCCGGCCAC

18

2.8

orangutan

ppy-mir-4529

AUUGGACUGCUGAUGGCCUG

18

3.6

orangutan

ppy-mir-4743

UGGCCGGAUGGGACAGGAGGCA

18

5.4

orangutan

ppy-mir-3188

AGAGGCUUUGUGCGGACUCGG

19

1.1

orangutan

ppy-mir-3940

CAGCCCGGAUCCCAGCCCACUCA

19

1.5

orangutan

ppy-mir-320e

AAAAGCUGGGUUGAGAAGGUGA

19

4.6

orangutan

ppy-mir-3617

AAAGACAUAGUUGCAAGAUGGG

20

1.6

orangutan

ppy-mir-378d

ACUGGACUUGGAGUCAGA

X

4.3

orangutan

ppy-mir-676

CCGUCCUAAGGUUGUUGAGUUG

X

5.1

rhesus macaque

mml-mir-1255b

UACGGAUAAGCAAAGAAAGUGG

1

2.1

rhesus macaque

mml-mir-320b

AAAAGCUGGGUUGAGAGGGCAA

1

5.1

rhesus macaque

mml-mir-3122

GUUGGGACAAGAGAACGGUCU

1

5.5

rhesus macaque

mml-mir-1262

UGAUGGGUGAAUUUGUAGAAGG

1

647.1

rhesus macaque

mml-mir-4446

CAGGGCUGGCAGUGAGAUGGG

2

26007.7

rhesus macaque

mml-mir-1284

UCUGUACAGACCCUGGCUUU

2

4.5

rhesus macaque

mml-mir-4796

AAGUGGCAGAGUGUAGACACAA

2

5.9

rhesus macaque

mml-mir-3146

CAUGCUAGAACAGAAAGAAUGGG

3

5

rhesus macaque

mml-mir-4650

UGGAAGGUAGAAUGAGGCCUGAU

3

5.8

rhesus macaque

mml-mir-3145

UAUUUUGAGUGUUUGGAAUUGA

4

4.8

rhesus macaque

mml-mir-1243

AAACUGGAUCAAUUAUAGGAG

5

17.7

rhesus macaque

mml-mir-378d

ACUGGACUUGGAGUCAGAAGCA

5

4.8

rhesus macaque

mml-mir-3140

AAGAGCUUUUGGGAAUUCAGG

5

5.3

rhesus macaque

mml-mir-1255a

AGGAUGAGCAAAGGAAGUAGU

5

5.7

rhesus macaque

mml-mir-4803

UAACAUAAUAGUGUGGACUGA

6

5.6

rhesus macaque

mml-mir-1271

CUUGGCACCUAGCAAGCACUCA

6

980.3

rhesus macaque

mml-mir-1179

AAGCAUUCUUUCAUUGGUUGG

7

16.9

rhesus macaque

mml-mir-1185

AGAGGAUACCCUUUGUAUGU

7

5.2

rhesus macaque

mml-mir-3173

GAAGGAGGAAACAGGCAGGCCAG

7

5.8

rhesus macaque

mml-mir-4716

AAGGGGGAAGGACACAUGGAGA

7

6.1

rhesus macaque

mml-mir-3151

ACGGGUGGCGCAAUGGGAUCAG

8

223.8

rhesus macaque

mml-mir-1296

UUAGGGCCCUGGCUCCAUCUCCU

9

5.5

rhesus macaque

mml-mir-1249

ACGCCCUUCCCCCCCUUCUUCA

10

118

rhesus macaque

mml-mir-3200

CACCUUGCGCUACUCAGGUCUG

10

202.6

rhesus macaque

mml-mir-1258

AGUUAGGAUUAGGUCGUGGAA

12

5.9

rhesus macaque

mml-mir-217b

UACUGCAUCAGGAACUGAUUGGA

13

4.3

rhesus macaque

mml-mir-1260b

AUCCCACCACUGCCACCA

14

5.6

rhesus macaque

mml-mir-1304

UUCGAGGCUACAAUGAGAUGUG

14

5.8

rhesus macaque

no id*2

CCAGGCUGGAGUGCAGUGG

15

4.1

rhesus macaque

mml-mir-873

GCAGGAACUUGUGAGUCUCC

15

4275.6

rhesus macaque

mml-mir-4667

ACUGGGGAGCAGAAGGAGAAC

15

5.5

rhesus macaque

mml-mir-3927

CAGGUAGAUAUUUGAUAGGCA

15

6.1

rhesus macaque

mml-mir-1250

ACGGUGCUGAAUGUGGCCUU

16

5.6

rhesus macaque

mml-mir-320c

AAAAGCUGGGUUGACAGGGUAA

18

3.8

rhesus macaque

mml-mir-4743

UGGCCGGAUGGGACAGGAGGCA

18

5.3

rhesus macaque

mml-mir-518d

CUCUAGAGGAAAGCGCUUACUG

19

103

rhesus macaque

mml-mir-517c

AUCGUGCAGCCUUUUAGAGUG

19

106.7

rhesus macaque

mml-mir-519e

UUCUCCAAUGGGAAGCACCUUC

19

132.7

rhesus macaque

mml-mir-1283

CUACAAAGGAAAGCACUUUC

19

4.9

rhesus macaque

mml-mir-1323

UCAAAACUGAGGGGCAUUUUC

19

6232.9

rhesus macaque

mml-mir-1298

UUCAUUCGGCUGUCCAGAUGUA

X

198.4

rhesus macaque

mml-mir-891b

UGCAACGAACUUGAGCCAUUGA

X

24.7

rhesus macaque

mml-mir-2114

CGAGCCUCAAGCAAGGGACUUC

X

25.3

rhesus macaque

mml-mir-4536

UGUGGUAGAUAUAUGCACGA

X

4.2

rhesus macaque

mml-mir-1277

UACGUAGAUAUAUAUGUAUUU

X

543.7

rhesus macaque

mml-mir-676

CCGUCCUAAGGUUGUUGAGU

X

766.4

rhesus macaque

mml-mir-514b

AUUGACACCUCUGUGAGUAGA

X

997.4

  1. *1,2 miRBase did not provide names due to ambiguous N bases in the hairpin sequence or missing relationships to existing miRNAs in the database.