SNP mining in C. clementina BAC end sequences; transferability in the Citrus genus (Rutaceae), phylogenetic inferences and perspectives for genetic mapping

Table 5 Diversity parameters for loci with null alleles (WNA)

	% L. P.	MLGs	GD	Null	Ho
C. maxima (10)	41.38	10	0.145+/-0.036	0.609	0.037
C. medica (5)	17.24	5	0.060+/-0.025	0.641	0.041
C. reticulata (12)	80.17	12	0.361+/-0.040	0.111	0.234
C. aurantifolia (4)	70.69	4	0.308+/-0.038	0.405	0.045
C. aurantium (2)	15.52	2	0.004+/-0.008	0.103	0.151
C. limon (7)	73.27	6	0.317+/-0.041	0.190	0.086
C. paradisi (2)	8.62	1	0+/-0	0.224	0.086
C. sinensis (4)	24.13	1	0/-0	0.086	0.241
Wild Citrus (5)	76.72	5	0.329+/-0.037	0.474	0.036
All samples (54)	100	47	0.546+/-0.021	0.326	0.121

%LP: percentage of polymorphic loci, MLGs: number of multilocus genotypes differentiated; GD: genotypic diversity; Null: average proportion of Homozygous for null allele; Ho: average proportion of observed heterozygous (2 different bases).

ISSN: 1471-2164