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Table 8 Comparison of validated exon/intron boundaries between PCR results and the predicted gene models

From: The Physalis peruviana leaf transcriptome: assembly, annotation and gene model prediction

P. peruviana unique identifier

Position of boundary of the 2 adjacent exons at the mRNA

Match predicted gene model?

PCR results

Predicted model

Php00a01046.06900

1077/1078

1077/1078

Precisely

Php00a05845.15798

297/298

294/295

3 bp shift

Php00a02208.09960

653/654

647/648

6 bp shift

Php00a06435.16388

774/775

774/775

Precisely

Php00a02812.11168

751/752

749/750

2 bp shift

Php00a03329.12202

756/757

756/757

Precisely

Php00a02563.10671

1040/1041

1037/1038

3 bp shift

Php00a01985.09526

416/417

417/418

1 bp shift