Skip to main content

Table 3 PAC strains included to study the suitability of mtDNA markers for species diagnosis

From: Mitochondrial genome evolution in species belonging to the Phialocephala fortinii s.l. - Acephala applanata species complex

Taxon

Strain1

Culture collection number2

Host

Geographic origin

GenBank accession numbers

     

cox1 3

rnl

Rps3 - N-acetyl- transferase

atp9 - nad4

Phialocephala turicensis

1_124_1

CBS 119234

Picea abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091454]

[GenBank:JN091495]

[GenBank:JN091530]

 

1_124_2

 

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091455]

[GenBank:JN091496]

[GenBank:JN091531]

 

1_176_1*

CBS 119264

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091456]

[GenBank:JN091497]

[GenBank:JN091532]

 

1_197_4

CBS 119265

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091457]

[GenBank:JN091498]

[GenBank:JN091533]

Phialocephala letzii

2_120_3

CBS 119266

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091458]

[GenBank:JN091499]

[GenBank:JN091534]

 

2_126_3

 

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091459]

[GenBank:JN091500]

[GenBank:JN091535]

 

2_146_1*

CBS 119268

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091460]

[GenBank:JN091501]

[GenBank:JN091536]

 

2_152_2

CBS 119267

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091461]

[GenBank:JN091502]

[GenBank:JN091537]

Phialocephala europaea

3_117_2

CBS 119269

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091462]

[GenBank:JN091503]

[GenBank:JN091538]

 

3_122_3

CBS 119270

P. abies

Zürichberg; Switzerland

[GenBank:JN091450]

[GenBank:JN091463]

[GenBank:JN091504]

[GenBank:JN091529]

 

3_136_1

 

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091464]

[GenBank:JN091505]

[GenBank:JN091539]

 

3_171_5*

CBS 119271

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091465]

[GenBank:JN091506]

[GenBank:JN091540]

Phialocephala helvetica

4_123_4

CBS 119272

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091466]

[GenBank:JN091507]

[GenBank:JN091541]

 

4_136_4

 

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091467]

[GenBank:JN091508]

[GenBank:JN091542]

 

4_138_5*

CBS 119273

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091468]

[GenBank:JN091509]

[GenBank:JN091543]

 

4_145_2

CBS 119274

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091469]

[GenBank:JN091510]

[GenBank:JN091544]

 

4_153_2

 

P. abies

Zürichberg; Switzerland

[GenBank:JN091451]

[GenBank:JN091470]

[GenBank:JN091511]

[GenBank:JN091545]

Phialocephala uotiloensis

5_134_3

 

P. abies

Zürichberg; Switzerland

n.a.

[GenBank:JN091471]

[GenBank:JN091512]

[GenBank:JN091546]

 

5_220_1

CBS 119276

P. abies

Uetliberg; Switzerland

n.a.

[GenBank:JN091472]

[GenBank:JN091513]

[GenBank:JN091547]

 

5_234_5

CBS 119277

P. abies

Uetliberg; Switzerland

n.a.

[GenBank:JN091473]

[GenBank:JN091514]

[GenBank:JN091548]

 

5_264_1r*

CBS 119275

P. abies

Uetliberg; Switzerland

n.a.

[GenBank:JN091474]

[GenBank:JN091515]

[GenBank:JN091549]

Phialocephala subalpina

6_30_4

CBS 119279

P. abies

Bödmeren; Switzerland

n.a.

[GenBank:JN091475]

[GenBank:JN091516]

[GenBank:JN091550]

 

6_35_6v

CBS 119278

Vaccinium myrtillus

Bödmeren; Switzerland

n.a.

[GenBank:JN091476]

[GenBank:JN091517]

[GenBank:JN091551]

 

6_70_1

UAMH 11012

P. abies

Bödmeren; Switzerland

[GenBank:JN031566]

[GenBank:JN031566]

[GenBank:JN031566]

[GenBank:JN031566]

 

6_78_2*

CBS 119280

P. abies

Bödmeren; Switzerland

n.a.

[GenBank:JN091477]

[GenBank:JN091518]

[GenBank:JN091553]

Phialocephala fortinii s.s.

7_6_7v

 

V. myrtillus

Bödmeren; Switzerland

[GenBank:JN091452]

[GenBank:JN091480]

[GenBank:JN091519]

[GenBank:JN091554]

 

7_45_5

CBS 119281

P. abies

Bödmeren; Switzerland

n.a.

[GenBank:JN091478]

[GenBank:JN091520]

[GenBank:JN091555]

 

7_62_7v

CBS 119282

V.myrtillus

Bödmeren; Switzerland

n.a.

[GenBank:JN091479]

[GenBank:JN091521]

[GenBank:JN091556]

 

7_K92_049

CBS 114608

P. abies

Odenwald; Germany

n.a.

[GenBank:JN091481]

[GenBank:JN091522]

[GenBank:JN091557]

 

7_K93_444*

CBS 443.86

P. sylvestris

Suonenjoki; Finland

n.a.

[GenBank:JN091482]

[GenBank:JN091523]

[GenBank:JN091558]

Acephala applanata

T1_50_2

 

P. abies

Bödmeren; Switzerland

n.a.

[GenBank:JN091483]

[GenBank:JN091524]

[GenBank:JN091559]

 

T1_51_3

 

P. abies

Bödmeren; Switzerland

n.a.

[GenBank:JN091484]

[GenBank:JN091525]

[GenBank:JN091560]

 

T1_K92_113*

CBS 109321

P. abies

Bödmeren; Switzerland

n.a.

[GenBank:JN091485]

[GenBank:JN091526]

[GenBank:JN091561]

 

T1_K92_131

CBS 109322

P. abies

Bödmeren; Switzerland

[GenBank:JN091453]

[GenBank:JN091486]

[GenBank:JN091527]

[GenBank:JN091562]

  1. Strains of cryptic species of Phialocephala fortinii s.l. and Acephala applanata included to study the suitability of mtDNA markers for species diagnosis
  2. 1type strains are marked by an asterisk
  3. 2CBS, Centralbureau voor Schimmelcultures, Utrecht, The Netherlands; UAMH, University of Alberta, Microfungus Collection and Herbarium, Alberta, Canada
  4. 3sequences are only available for strains included in the screening to detect mtDNA polymorphisms