From: Improving the performance of true single molecule sequencing for ancient DNA
Sample | Platform | # | Conditions | #Seqs | nucDNA | bp | mtDNA | bp | %Endo. |
---|---|---|---|---|---|---|---|---|---|
TP1 | 110 V | 1 | 80°C, Phosphatase | 1,980,210 | 85,738 | 2,885,229 | 53 | 1,845 | 4.33% |
 | 110 V | 1 | 80°C | 234,094 | 28,797 | 998,007 | 8 | 255 | 12.30% |
 | 110 V | 1 | 95°C | 228,871 | 12,573 | 438,111 | 5 | 162 | 5.50% |
TP1RE | 110 V | 1 | 80°C, Phosphatase | 1,607,848 | 161,284 | 5,597,277 | 99 | 3,378 | 10.04% |
 | 550 V | 8 | 80°C, Phosphatase | 16,290,720 | 1,480,012 | 46,444,135 | 935 | 29,637 | 9.09% |
 | 110 V | 1 | 80°C | 214,070 | 48,304 | 1,718,507 | 29 | 991 | 22.58% |
 | 110 V | 1 | 95°C | 356,586 | 51,052 | 1,798,348 | 31 | 1,169 | 14.33% |
TP2 | 110 V | 1 | 80°C, Phosphatase | 2,088,705 | 177,944 | 6,147,860 | 50 | 1,713 | 8.52% |
 | 110 V | 1 | 80°C | 216,159 | 53,463 | 1,879,011 | 16 | 560 | 24.74% |
 | 110 V | 1 | 95°C | 354,155 | 62,259 | 2,170,975 | 15 | 516 | 17.58% |
TP2RE | 110 V | 1 | 80°C, Phosphatase | 233,613 | 32,045 | 1,094,783 | 10 | 318 | 13.72% |
 | 110 V | 1 | 80°C | 213,958 | 59,530 | 2,072,120 | 26 | 928 | 27.84% |
 | 110 V | 1 | 95°C | 247,784 | 55,848 | 1,939,018 | 22 | 781 | 22.55% |