Table 2 Transcripts with functional domains deleted that were experimentally confirmed by PCR
Isotig annotation | CDS fraction (%) | Transcripts coverage | Orthologs ID | Number of exons predicted | Exon deleted | IPR domain lost | Function |
|---|---|---|---|---|---|---|---|
Aspartate beta hydroxylase | 37 | 4 | ENSTNIT000000003370 | 3 | 2 | IPR018939 | Authophagic related protein 27 (ATG27) |
Coagulation factor x | 75 | 4 | ENSGACT00000011445 | 13 | 9 and 10 | IPR000294 | GLA domain |
| Â | Â | Â | Â | Â | Â | IPR000742 | EGF3 domain |
Nucleotide binding | 88 | 4 | ENSGACT00000002245 | 9 | 1 and 2 | IPR000808 | Mrp site |
| Â | Â | Â | Â | Â | Â | IPR019591 | ATPase like ParA |
Bridging integrator 1 | 100 | 50 | ENSGACT00000020571 | 18 | 1 to 10 | IPR004148 | PAR domain |
| Â | Â | Â | Â | Â | Â | IPR003005 | Amphyphysin |
Paraxonase 2 | 87 | 5 | ENSTNIG00000018456 | 14 | 12 | No-IPR | Signal Peptide |
| Â | Â | Â | Â | Â | Â | IPR013838 | autoregulation binding site |
Cathepsin H | 75 | 4 | ENSTNIG00000022446 | 7 | 1 | IPR013201 | Proteinase inhibitor, cathepsin propeptide |
Polyadenylate-binding protein- interacting protein 2 | 100 | 4 | ENSTNIG00000005741 | 8 | 6 | IPR009818 | Ataxin 2 |
Transitional endoplasmic reticulum atpase (cdc48) | 100 | 40 | ENSGACG00000018832 | 9 | 8 | IPR003338 | AAA + Atpase domain |
| Â | Â | Â | Â | Â | Â | IPR009010 | Aspartate descarboxylase fold |
S-adenosylmethionine decarboxylase | 50 | 5 | ENSTNIG00000002751 | 6 | 5 | IPR018166 | adenosylmethionine descarboxylase |
O-sialoglycoprotein endopeptidase | 62 | 4 | ENSGACG00000019496 | 6 | 5 | IPR017860 | Peptidase M22, Glycopeptidase |
Zinc finger x-chromosomal protein | 30 | 4 | ENSGACG00000020679 | 2 | 1 | IPR007087 | Zinc finger C2H2 |
Dead (asp-glu-ala-asp) box polypeptide 1 | 57 | 6 | ENSGACG00000011162 | 13 | 8 | IPR000504 | RNA recognition motif domain |