The dependence of expression of NF-κB-dependent genes: statistics and evolutionary conservation of control sequences in the promoter and in the 3′ UTR

Table 8 Classification of genes common to Tian et al. and Hao & Baltimore studies

Gene name	Classification based on ARE count (mRNA stability)[34]	Classification based on expression pattern[2]
PTGS2	Early	Early
CXCL1	Early	Early
CXCL2	Early	Early
IL6	Early	Early
TNFAIP3	Early	Early
NFKBIA	Early	Early
IRF1	Early	Early
ICAM1	Middle/ Early	Late
CCL20	Middle/Early	Early
IFNGR2	Middle	Middle
NFKBIE	Middle	Middle
RELB	Middle	Middle
TNFAIP2	Middle	Middle
TAPBP	Late	Late

Classification of genes common to Hao and Tian studies. Columns: classification based on ARE occurrence in 3′UTR[34], and classification based on expression timing after TNF simulation[2]. Borderline genes shown in bold.

ISSN: 1471-2164