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Table 4 SNPs > 200 bp outside target regions

From: Exome sequencing generates high quality data in non-target regions

Samples Average depth Intronic Splicinga ncRNAb Intergenic Exonic
Non-synonymous Stopgain Stoploss
SureSelect ≥ 5 6194 35 4873 33569 981 25 4
(n = 22) ≥ 10 4297 34 3790 21713 792 17 3
TrueSeq ≥ 5 29372 8 7537 74431 211 4 0
(n = 6) ≥ 10 16252 7 10153 60889 199 4 0
1000 G ≥ 5 2619 11 309 1951 307 6 1
(n = 6) ≥ 10 1352 8 168 1183 213 5 1
  1. a Variant is within 2-bp of a splicing junction.
  2. b Variant overlaps a transcript without coding annotation in the gene definition.