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Table 2 Parameters associated with the QTLs identified in progeny 1 (P1) and progeny (P2) using a one-QTL test

From: A maximum likelihood QTL analysis reveals common genome regions controlling resistance to Salmonella colonization and carrier-state

Chr1

Progeny

Trait

QTL position

(cM)

C.I.2

(cM)

LRT3

Flanking markers4(Mb)

P-value5

(Chr)

S.L.6

2

P1

CAEC

86

80-92

66.83

31.8-38.3

<0.005

***

3

P2

CAEC

236

234-241

30.29

94.25-98.25

<0.01

**

19

P1

CAEC

21

17-29

56.01

2.71-3.80

<0.01

**

21

P1

CSW4

3

0-6

21.48

0.40-1.22

<0.05

*

23

P1

CAEC

10

7-15

50.25

1.32-2.74

<0.005

*

23

P1

CSW4d

1

0-6

46.83

0.72-1.32

<0.05

*

26

P2

CAEC

29

21-37

49.30

2.60-3.31

<0.05

*

  1. 1Chromosome number.
  2. 21-LOD-drop confidence interval (cM).
  3. 3Likelihood Ratio Test.
  4. 4Positions of the two markers flanking the QTL peak.
  5. 5P-values obtained by 1000 chromosome-wide permutations.
  6. 6Significance level: *significant at P < 0.05 at the chromosome-wide level, ** significant at P < 0.01 at the chromosome-wide level, *** significant at P < 0.05 at the genome-wide level.