Table 2 General features of the G. lovleyi strain SZ plasmid pSZ77
Plasmid | Â | Â |
|---|---|---|
| Â | Size (bp) | 77,113 |
| Â | GC percentage | 53.0 |
| Â | Total number of protein-coding genes | 81 |
| Â | Number of pseudogenes | 2 |
Protein-coding genes | Â | |
| Â | Number of intact protein-coding genes | 79 |
| Â | - matching annotated homologs | 66 |
| Â | - matching genes with hypothetical function only | 6 |
| Â | - with no public database matches | 7 |
| Â | - in one or more COGs | 66 |
| Â | - in energy production COGs | 3 |
| Â | - in coenzyme metabolism COGs | 18 |
| Â | - predicted as c-type cytochromes | 0 |
| Â | - percent with top BlastP match in Geobacter (7 genomes) | 11% |
| Â | - percent with top BlastP match in Pelobacter (2 genomes) | 24% |
|  | - percent with top BlastP match in other δ-Proteobacteria | 37% |
Non-protein-coding features | Â | |
| Â | Number of rRNA operons (16S-23S-5S) | 0 |
| Â | Number of transfer RNAs | 0 |